Strain Fitness in Sinorhizobium meliloti 1021 around SMa5031
Experiment: Cisplatin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
761,927 | - | SMa1381 | 0.49 | +0.4 | |
762,308 | + | SMa1381 | 0.77 | -0.8 | |
762,308 | + | SMa1381 | 0.77 | -0.9 | |
762,443 | - | SMa1381 | 0.87 | -0.0 | |
762,443 | - | SMa1381 | 0.87 | +0.2 | |
762,655 | + | SMa5031 | 0.17 | -0.7 | |
762,736 | + | SMa5031 | 0.48 | -1.2 | |
763,064 | + | SMa1386 | 0.20 | +0.5 | |
763,251 | + | SMa1386 | 0.39 | -1.0 | |
763,251 | + | SMa1386 | 0.39 | -1.7 | |
763,296 | + | SMa1386 | 0.44 | +0.9 | |
763,296 | + | SMa1386 | 0.44 | -2.0 | |
763,297 | - | SMa1386 | 0.44 | +0.7 | |
763,400 | + | SMa1386 | 0.54 | +1.2 | |
763,401 | - | SMa1386 | 0.55 | +0.9 | |
763,402 | + | SMa1386 | 0.55 | -0.1 | |
763,403 | - | SMa1386 | 0.55 | -0.2 | |
763,571 | + | SMa1386 | 0.72 | +0.6 | |
763,572 | - | SMa1386 | 0.72 | +0.2 | |
763,572 | - | SMa1386 | 0.72 | -0.4 | |
763,572 | - | SMa1386 | 0.72 | +0.4 | |
763,572 | - | SMa1386 | 0.72 | +0.5 | |
763,578 | + | SMa1386 | 0.73 | -0.7 | |
763,661 | - | SMa1386 | 0.81 | -0.1 |
Or see this region's nucleotide sequence