Experiment: Cisplatin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa0527 and SMa5025 are separated by 700 nucleotides SMa5025 and SMa0535 are separated by 51 nucleotides SMa0535 and SMa0537 are separated by 281 nucleotides SMa0537 and SMa0538 are separated by 4 nucleotides
SMa0527: SMa0527 - phosphatase, at 285,619 to 286,218
SMa0527
SMa5025: SMa5025 - hypothetical protein, at 286,919 to 287,350
SMa5025
SMa0535: SMa0535 - hypothetical protein, at 287,402 to 287,641
SMa0535
SMa0537: SMa0537 - hypothetical protein, at 287,923 to 288,336
SMa0537
SMa0538: SMa0538 - hypothetical protein, at 288,341 to 288,703
SMa0538
Position (kb) 286
287
288 Strain fitness (log2 ratio) -2
-1
0
1
2 at 285.919 kb on + strand, within SMa0527 at 285.920 kb on - strand, within SMa0527 at 285.943 kb on + strand, within SMa0527 at 285.943 kb on + strand, within SMa0527 at 285.944 kb on - strand, within SMa0527 at 286.131 kb on + strand, within SMa0527 at 286.132 kb on - strand, within SMa0527 at 286.132 kb on - strand, within SMa0527 at 286.253 kb on - strand at 286.253 kb on - strand at 286.253 kb on - strand at 286.253 kb on - strand at 286.253 kb on - strand at 286.348 kb on - strand at 286.358 kb on - strand at 286.386 kb on + strand at 286.386 kb on + strand at 286.387 kb on - strand at 286.420 kb on + strand at 286.420 kb on + strand at 286.420 kb on + strand at 286.420 kb on + strand at 286.420 kb on + strand at 286.549 kb on + strand at 286.686 kb on - strand at 286.788 kb on - strand at 286.788 kb on - strand at 286.819 kb on - strand at 286.851 kb on - strand at 286.851 kb on - strand at 286.853 kb on + strand at 286.854 kb on - strand at 287.076 kb on + strand, within SMa5025 at 287.076 kb on + strand, within SMa5025 at 287.077 kb on - strand, within SMa5025 at 287.345 kb on - strand at 287.345 kb on - strand at 287.379 kb on + strand at 287.671 kb on + strand at 287.672 kb on - strand at 287.672 kb on - strand at 287.674 kb on - strand at 287.781 kb on + strand at 287.782 kb on - strand at 287.857 kb on - strand at 287.857 kb on - strand at 287.857 kb on - strand at 287.857 kb on - strand at 287.860 kb on - strand at 287.883 kb on + strand at 287.883 kb on + strand at 287.883 kb on + strand at 287.883 kb on + strand at 287.884 kb on - strand at 287.931 kb on + strand at 287.931 kb on + strand at 287.932 kb on - strand at 287.958 kb on + strand at 287.958 kb on + strand at 288.013 kb on + strand, within SMa0537 at 288.230 kb on - strand, within SMa0537 at 288.230 kb on - strand, within SMa0537 at 288.231 kb on + strand, within SMa0537 at 288.231 kb on + strand, within SMa0537 at 288.231 kb on + strand, within SMa0537 at 288.231 kb on + strand, within SMa0537 at 288.232 kb on - strand, within SMa0537 at 288.277 kb on + strand, within SMa0537 at 288.277 kb on + strand, within SMa0537 at 288.278 kb on - strand, within SMa0537 at 288.280 kb on - strand at 288.280 kb on - strand, within SMa0537 at 288.280 kb on - strand, within SMa0537 at 288.280 kb on - strand, within SMa0537 at 288.280 kb on - strand, within SMa0537
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.001 mg/ml remove 285,919 + SMa0527 0.50 +0.5 285,920 - SMa0527 0.50 +0.3 285,943 + SMa0527 0.54 +0.5 285,943 + SMa0527 0.54 -0.1 285,944 - SMa0527 0.54 +1.6 286,131 + SMa0527 0.85 -2.4 286,132 - SMa0527 0.85 -2.1 286,132 - SMa0527 0.85 +0.1 286,253 - -1.2 286,253 - -0.0 286,253 - -0.4 286,253 - +1.1 286,253 - +1.0 286,348 - -1.4 286,358 - +1.9 286,386 + +2.5 286,386 + -0.2 286,387 - +0.1 286,420 + -0.9 286,420 + +0.0 286,420 + +1.2 286,420 + -1.8 286,420 + -0.8 286,549 + +0.2 286,686 - +0.1 286,788 - -0.5 286,788 - -2.4 286,819 - +0.7 286,851 - +1.1 286,851 - +0.1 286,853 + -0.7 286,854 - +0.7 287,076 + SMa5025 0.36 -2.5 287,076 + SMa5025 0.36 -0.3 287,077 - SMa5025 0.37 -0.4 287,345 - +1.2 287,345 - +0.3 287,379 + -1.1 287,671 + -0.5 287,672 - -1.9 287,672 - +0.9 287,674 - +1.2 287,781 + +0.5 287,782 - +1.5 287,857 - +0.1 287,857 - -2.7 287,857 - -0.0 287,857 - +0.8 287,860 - -0.4 287,883 + +0.3 287,883 + -0.2 287,883 + -0.0 287,883 + +0.0 287,884 - +0.2 287,931 + +0.0 287,931 + +1.6 287,932 - -1.0 287,958 + -2.2 287,958 + -0.5 288,013 + SMa0537 0.22 -0.5 288,230 - SMa0537 0.74 +0.4 288,230 - SMa0537 0.74 +2.5 288,231 + SMa0537 0.74 -0.1 288,231 + SMa0537 0.74 -2.1 288,231 + SMa0537 0.74 -0.4 288,231 + SMa0537 0.74 -1.9 288,232 - SMa0537 0.75 -0.1 288,277 + SMa0537 0.86 -0.1 288,277 + SMa0537 0.86 -1.4 288,278 - SMa0537 0.86 +0.3 288,280 - -1.4 288,280 - SMa0537 0.86 -0.2 288,280 - SMa0537 0.86 -2.6 288,280 - SMa0537 0.86 -2.2 288,280 - SMa0537 0.86 +0.7
Or see this region's nucleotide sequence