Experiment: Cisplatin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa2217 and SMa2219 are separated by 2 nucleotides SMa2219 and SMa2221 overlap by 4 nucleotides SMa2221 and SMa2223 overlap by 4 nucleotides
SMa2217: SMa2217 - decarboxylase, at 1,241,610 to 1,242,935
SMa2217
SMa2219: SMa2219 - decarboxylase, at 1,242,938 to 1,243,531
SMa2219
SMa2221: SMa2221 - hypothetical protein, at 1,243,528 to 1,244,241
SMa2221
SMa2223: SMa2223 - oxidoreductase, at 1,244,238 to 1,245,344
SMa2223
Position (kb)
1243
1244
1245 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1242.681 kb on - strand, within SMa2217 at 1242.709 kb on - strand, within SMa2217 at 1242.765 kb on - strand, within SMa2217 at 1243.105 kb on - strand, within SMa2219 at 1243.342 kb on + strand, within SMa2219 at 1243.343 kb on - strand, within SMa2219 at 1243.343 kb on - strand, within SMa2219 at 1243.397 kb on + strand, within SMa2219 at 1243.397 kb on + strand, within SMa2219 at 1243.397 kb on + strand, within SMa2219 at 1243.543 kb on - strand at 1243.756 kb on - strand, within SMa2221 at 1243.871 kb on + strand, within SMa2221 at 1243.871 kb on + strand, within SMa2221 at 1243.871 kb on + strand, within SMa2221 at 1243.871 kb on + strand, within SMa2221 at 1243.871 kb on + strand, within SMa2221 at 1243.872 kb on - strand, within SMa2221 at 1243.872 kb on - strand, within SMa2221 at 1243.872 kb on - strand, within SMa2221 at 1243.872 kb on - strand, within SMa2221 at 1243.872 kb on - strand, within SMa2221 at 1243.872 kb on - strand, within SMa2221 at 1243.872 kb on - strand, within SMa2221 at 1243.872 kb on - strand, within SMa2221 at 1243.872 kb on - strand, within SMa2221 at 1244.058 kb on - strand, within SMa2221 at 1244.138 kb on - strand, within SMa2221 at 1244.195 kb on + strand at 1244.211 kb on - strand at 1244.327 kb on + strand at 1244.421 kb on + strand, within SMa2223 at 1244.421 kb on + strand, within SMa2223 at 1244.421 kb on + strand, within SMa2223 at 1244.501 kb on - strand, within SMa2223 at 1244.570 kb on + strand, within SMa2223 at 1244.645 kb on - strand, within SMa2223 at 1244.654 kb on - strand, within SMa2223 at 1244.767 kb on + strand, within SMa2223 at 1245.182 kb on + strand, within SMa2223 at 1245.182 kb on + strand, within SMa2223 at 1245.186 kb on + strand, within SMa2223 at 1245.186 kb on + strand, within SMa2223 at 1245.186 kb on + strand, within SMa2223 at 1245.187 kb on - strand, within SMa2223 at 1245.187 kb on - strand, within SMa2223 at 1245.216 kb on + strand, within SMa2223
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.001 mg/ml remove 1,242,681 - SMa2217 0.81 +2.4 1,242,709 - SMa2217 0.83 +0.3 1,242,765 - SMa2217 0.87 +1.8 1,243,105 - SMa2219 0.28 +0.2 1,243,342 + SMa2219 0.68 -2.2 1,243,343 - SMa2219 0.68 -0.1 1,243,343 - SMa2219 0.68 +1.5 1,243,397 + SMa2219 0.77 -0.4 1,243,397 + SMa2219 0.77 +0.1 1,243,397 + SMa2219 0.77 +0.4 1,243,543 - +0.2 1,243,756 - SMa2221 0.32 -0.1 1,243,871 + SMa2221 0.48 -0.8 1,243,871 + SMa2221 0.48 -1.0 1,243,871 + SMa2221 0.48 -0.7 1,243,871 + SMa2221 0.48 -0.3 1,243,871 + SMa2221 0.48 -1.1 1,243,872 - SMa2221 0.48 -0.2 1,243,872 - SMa2221 0.48 -2.6 1,243,872 - SMa2221 0.48 +0.2 1,243,872 - SMa2221 0.48 -0.6 1,243,872 - SMa2221 0.48 +1.0 1,243,872 - SMa2221 0.48 -0.7 1,243,872 - SMa2221 0.48 -1.3 1,243,872 - SMa2221 0.48 +0.1 1,243,872 - SMa2221 0.48 +1.0 1,244,058 - SMa2221 0.74 -0.3 1,244,138 - SMa2221 0.85 +1.0 1,244,195 + +0.7 1,244,211 - +0.4 1,244,327 + -0.1 1,244,421 + SMa2223 0.17 -0.5 1,244,421 + SMa2223 0.17 -1.2 1,244,421 + SMa2223 0.17 -2.7 1,244,501 - SMa2223 0.24 +1.5 1,244,570 + SMa2223 0.30 -0.1 1,244,645 - SMa2223 0.37 -1.1 1,244,654 - SMa2223 0.38 +0.3 1,244,767 + SMa2223 0.48 +0.5 1,245,182 + SMa2223 0.85 +2.2 1,245,182 + SMa2223 0.85 +0.9 1,245,186 + SMa2223 0.86 +0.2 1,245,186 + SMa2223 0.86 -2.6 1,245,186 + SMa2223 0.86 +0.2 1,245,187 - SMa2223 0.86 -0.8 1,245,187 - SMa2223 0.86 +3.6 1,245,216 + SMa2223 0.88 +0.5
Or see this region's nucleotide sequence