Strain Fitness in Sinorhizobium meliloti 1021 around SMa2089
Experiment: Cisplatin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,178,549 | - | SMa2087 | 0.18 | +0.2 | |
1,178,876 | - | SMa2087 | 0.49 | -0.6 | |
1,178,899 | + | SMa2087 | 0.52 | +0.0 | |
1,178,948 | - | SMa2087 | 0.56 | +0.4 | |
1,178,948 | - | SMa2087 | 0.56 | +1.1 | |
1,178,948 | - | SMa2087 | 0.56 | +0.3 | |
1,179,295 | + | SMa2087 | 0.90 | -1.5 | |
1,179,295 | + | SMa2087 | 0.90 | +0.3 | |
1,179,295 | + | SMa2087 | 0.90 | -0.8 | |
1,179,295 | + | SMa2087 | 0.90 | -0.9 | |
1,179,295 | + | SMa2087 | 0.90 | +0.2 | |
1,179,296 | - | SMa2087 | 0.90 | +0.3 | |
1,179,296 | - | SMa2087 | 0.90 | -0.3 | |
1,179,497 | + | SMa2089 | 0.23 | -2.1 | |
1,179,497 | + | SMa2089 | 0.23 | -1.3 | |
1,179,677 | + | SMa2089 | 0.74 | -1.2 | |
1,179,677 | + | SMa2089 | 0.74 | -0.3 | |
1,179,880 | + | SMa2091 | 0.14 | -0.8 | |
1,179,881 | - | SMa2091 | 0.14 | -0.5 | |
1,180,162 | + | SMa2091 | 0.45 | -0.3 | |
1,180,206 | + | SMa2091 | 0.50 | +0.2 |
Or see this region's nucleotide sequence