Experiment: Cisplatin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa0791 and SMa0792 are separated by 18 nucleotides SMa0792 and SMa0793 overlap by 4 nucleotides SMa0793 and SMa0794 overlap by 4 nucleotides
SMa0791: SMa0791 - hypothetical protein, at 430,599 to 431,201
SMa0791
SMa0792: SMa0792 - hypothetical protein, at 431,220 to 432,053
SMa0792
SMa0793: SMa0793 - hypothetical protein, at 432,050 to 432,985
SMa0793
SMa0794: SMa0794 - Monoxygenase, at 432,982 to 434,022
SMa0794
Position (kb) 431
432
433 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 430.598 kb on + strand at 430.598 kb on + strand at 430.598 kb on + strand at 430.599 kb on - strand at 430.679 kb on - strand, within SMa0791 at 430.679 kb on - strand, within SMa0791 at 430.789 kb on + strand, within SMa0791 at 430.790 kb on - strand, within SMa0791 at 430.793 kb on + strand, within SMa0791 at 430.793 kb on + strand, within SMa0791 at 430.901 kb on + strand, within SMa0791 at 430.924 kb on - strand at 430.950 kb on + strand, within SMa0791 at 430.951 kb on - strand, within SMa0791 at 430.968 kb on - strand, within SMa0791 at 431.041 kb on - strand, within SMa0791 at 431.232 kb on - strand at 431.232 kb on - strand at 431.298 kb on + strand at 431.326 kb on + strand, within SMa0792 at 431.327 kb on - strand, within SMa0792 at 431.327 kb on - strand, within SMa0792 at 431.356 kb on + strand, within SMa0792 at 431.414 kb on - strand, within SMa0792 at 431.414 kb on - strand, within SMa0792 at 431.605 kb on - strand, within SMa0792 at 431.605 kb on - strand, within SMa0792 at 431.791 kb on - strand, within SMa0792 at 431.791 kb on - strand, within SMa0792 at 431.832 kb on + strand, within SMa0792 at 431.833 kb on - strand, within SMa0792 at 431.833 kb on - strand, within SMa0792 at 431.975 kb on + strand at 431.975 kb on + strand at 431.976 kb on - strand at 431.976 kb on - strand at 431.976 kb on - strand at 431.976 kb on - strand at 431.976 kb on - strand at 431.986 kb on + strand at 431.987 kb on - strand at 432.160 kb on + strand, within SMa0793 at 432.175 kb on + strand, within SMa0793 at 432.176 kb on - strand, within SMa0793 at 432.176 kb on - strand, within SMa0793 at 432.236 kb on + strand, within SMa0793 at 432.451 kb on - strand, within SMa0793 at 432.451 kb on - strand, within SMa0793 at 432.451 kb on - strand, within SMa0793 at 432.606 kb on + strand, within SMa0793 at 432.741 kb on - strand, within SMa0793 at 432.874 kb on + strand, within SMa0793 at 432.875 kb on - strand, within SMa0793 at 432.923 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.001 mg/ml remove 430,598 + -1.0 430,598 + -2.9 430,598 + +1.6 430,599 - -0.0 430,679 - SMa0791 0.13 +0.4 430,679 - SMa0791 0.13 -0.4 430,789 + SMa0791 0.32 -1.8 430,790 - SMa0791 0.32 +0.4 430,793 + SMa0791 0.32 +1.0 430,793 + SMa0791 0.32 +1.0 430,901 + SMa0791 0.50 -1.1 430,924 - -1.2 430,950 + SMa0791 0.58 +1.2 430,951 - SMa0791 0.58 +0.8 430,968 - SMa0791 0.61 +0.1 431,041 - SMa0791 0.73 -1.2 431,232 - -0.4 431,232 - -0.9 431,298 + +0.6 431,326 + SMa0792 0.13 +3.1 431,327 - SMa0792 0.13 -1.2 431,327 - SMa0792 0.13 -0.3 431,356 + SMa0792 0.16 -1.5 431,414 - SMa0792 0.23 -0.0 431,414 - SMa0792 0.23 +0.4 431,605 - SMa0792 0.46 -0.0 431,605 - SMa0792 0.46 +0.3 431,791 - SMa0792 0.68 -0.7 431,791 - SMa0792 0.68 -0.5 431,832 + SMa0792 0.73 -1.5 431,833 - SMa0792 0.74 -1.5 431,833 - SMa0792 0.74 -0.5 431,975 + -1.4 431,975 + -2.3 431,976 - +1.8 431,976 - -0.6 431,976 - -1.4 431,976 - +0.4 431,976 - -1.4 431,986 + +4.1 431,987 - +0.1 432,160 + SMa0793 0.12 -0.9 432,175 + SMa0793 0.13 -1.0 432,176 - SMa0793 0.13 +0.6 432,176 - SMa0793 0.13 -0.3 432,236 + SMa0793 0.20 -2.8 432,451 - SMa0793 0.43 -3.5 432,451 - SMa0793 0.43 +0.2 432,451 - SMa0793 0.43 -0.2 432,606 + SMa0793 0.59 +0.3 432,741 - SMa0793 0.74 -3.7 432,874 + SMa0793 0.88 -0.2 432,875 - SMa0793 0.88 -2.0 432,923 + -0.1
Or see this region's nucleotide sequence