Strain Fitness in Sinorhizobium meliloti 1021 around SMa0787
Experiment: Cisplatin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
428,333 | + | SMa0787 | 0.11 | +3.5 | |
428,708 | + | SMa0787 | 0.57 | +0.5 | |
428,738 | + | SMa0787 | 0.61 | +2.2 | |
428,739 | - | SMa0787 | 0.61 | +0.3 | |
428,766 | + | SMa0787 | 0.64 | -3.4 | |
429,165 | - | -1.0 | |||
429,275 | + | -3.1 | |||
429,276 | - | -0.1 | |||
429,334 | + | -0.1 | |||
429,407 | + | -1.4 | |||
429,408 | - | -2.0 | |||
429,408 | - | +0.6 | |||
429,425 | + | +0.3 | |||
429,530 | + | SMa0789 | 0.13 | -1.4 | |
429,535 | + | SMa0789 | 0.14 | -4.4 | |
429,828 | + | SMa0789 | 0.56 | -3.3 | |
429,828 | + | SMa0789 | 0.56 | +0.1 | |
429,829 | - | SMa0789 | 0.56 | -0.3 | |
429,891 | - | SMa0789 | 0.65 | -2.4 | |
429,977 | + | SMa0789 | 0.77 | -2.8 |
Or see this region's nucleotide sequence