Experiment: Cisplatin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21643 and SM_b21644 are separated by 20 nucleotides SM_b21644 and SM_b21645 are separated by 11 nucleotides
SM_b21643: SM_b21643 - alpha-galactosidase (melibiase) protein, at 1,671,025 to 1,672,398
_b21643
SM_b21644: SM_b21644 - ABC transporter for D-Raffinose, ATPase component (from data) , at 1,672,419 to 1,674,089
_b21644
SM_b21645: SM_b21645 - ABC transporter for D-Raffinose, permease component 1 (from data) , at 1,674,101 to 1,675,228
_b21645
Position (kb)
1672
1673
1674
1675 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1671.422 kb on + strand, within SM_b21643 at 1671.422 kb on + strand, within SM_b21643 at 1671.623 kb on + strand, within SM_b21643 at 1671.647 kb on + strand, within SM_b21643 at 1671.647 kb on + strand, within SM_b21643 at 1671.648 kb on - strand, within SM_b21643 at 1671.780 kb on - strand, within SM_b21643 at 1671.953 kb on + strand, within SM_b21643 at 1671.954 kb on - strand, within SM_b21643 at 1671.954 kb on - strand, within SM_b21643 at 1671.954 kb on - strand at 1672.093 kb on - strand, within SM_b21643 at 1672.324 kb on + strand at 1672.325 kb on - strand at 1672.377 kb on + strand at 1672.403 kb on + strand at 1672.404 kb on - strand at 1672.404 kb on - strand at 1672.416 kb on - strand at 1672.588 kb on + strand, within SM_b21644 at 1672.588 kb on + strand, within SM_b21644 at 1672.869 kb on + strand, within SM_b21644 at 1672.869 kb on + strand, within SM_b21644 at 1672.869 kb on + strand, within SM_b21644 at 1672.869 kb on + strand, within SM_b21644 at 1672.870 kb on - strand, within SM_b21644 at 1672.870 kb on - strand, within SM_b21644 at 1672.997 kb on - strand, within SM_b21644 at 1672.997 kb on - strand, within SM_b21644 at 1673.174 kb on + strand, within SM_b21644 at 1673.273 kb on + strand, within SM_b21644 at 1673.274 kb on - strand, within SM_b21644 at 1673.347 kb on + strand, within SM_b21644 at 1673.348 kb on - strand, within SM_b21644 at 1673.348 kb on - strand, within SM_b21644 at 1673.572 kb on + strand, within SM_b21644 at 1673.704 kb on + strand, within SM_b21644 at 1673.812 kb on + strand, within SM_b21644 at 1673.812 kb on + strand, within SM_b21644 at 1673.813 kb on - strand, within SM_b21644 at 1673.841 kb on - strand, within SM_b21644 at 1673.932 kb on + strand at 1673.991 kb on + strand at 1674.198 kb on + strand at 1674.199 kb on - strand at 1674.217 kb on - strand, within SM_b21645 at 1674.377 kb on + strand, within SM_b21645 at 1674.424 kb on - strand, within SM_b21645 at 1674.424 kb on - strand, within SM_b21645 at 1674.791 kb on - strand, within SM_b21645 at 1674.846 kb on + strand, within SM_b21645 at 1674.847 kb on - strand, within SM_b21645 at 1674.891 kb on + strand, within SM_b21645 at 1674.954 kb on + strand, within SM_b21645 at 1674.955 kb on - strand, within SM_b21645
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.001 mg/ml remove 1,671,422 + SM_b21643 0.29 +0.8 1,671,422 + SM_b21643 0.29 +0.0 1,671,623 + SM_b21643 0.44 -0.3 1,671,647 + SM_b21643 0.45 -0.7 1,671,647 + SM_b21643 0.45 -1.1 1,671,648 - SM_b21643 0.45 +1.5 1,671,780 - SM_b21643 0.55 -0.2 1,671,953 + SM_b21643 0.68 -0.4 1,671,954 - SM_b21643 0.68 -0.7 1,671,954 - SM_b21643 0.68 -0.7 1,671,954 - -0.3 1,672,093 - SM_b21643 0.78 -0.2 1,672,324 + -2.4 1,672,325 - +0.3 1,672,377 + +0.8 1,672,403 + -0.2 1,672,404 - +0.0 1,672,404 - -1.3 1,672,416 - -1.4 1,672,588 + SM_b21644 0.10 +0.1 1,672,588 + SM_b21644 0.10 -1.6 1,672,869 + SM_b21644 0.27 +1.1 1,672,869 + SM_b21644 0.27 +0.1 1,672,869 + SM_b21644 0.27 -0.1 1,672,869 + SM_b21644 0.27 +0.0 1,672,870 - SM_b21644 0.27 +0.2 1,672,870 - SM_b21644 0.27 -0.6 1,672,997 - SM_b21644 0.35 +1.8 1,672,997 - SM_b21644 0.35 +0.7 1,673,174 + SM_b21644 0.45 +1.5 1,673,273 + SM_b21644 0.51 +0.1 1,673,274 - SM_b21644 0.51 +0.0 1,673,347 + SM_b21644 0.56 +1.4 1,673,348 - SM_b21644 0.56 -0.0 1,673,348 - SM_b21644 0.56 -1.3 1,673,572 + SM_b21644 0.69 -1.7 1,673,704 + SM_b21644 0.77 +0.6 1,673,812 + SM_b21644 0.83 +0.0 1,673,812 + SM_b21644 0.83 +0.8 1,673,813 - SM_b21644 0.83 +1.3 1,673,841 - SM_b21644 0.85 +0.1 1,673,932 + -0.1 1,673,991 + +2.6 1,674,198 + +1.7 1,674,199 - +1.1 1,674,217 - SM_b21645 0.10 +0.3 1,674,377 + SM_b21645 0.24 +0.7 1,674,424 - SM_b21645 0.29 +0.4 1,674,424 - SM_b21645 0.29 -0.7 1,674,791 - SM_b21645 0.61 +1.4 1,674,846 + SM_b21645 0.66 +0.2 1,674,847 - SM_b21645 0.66 +0.8 1,674,891 + SM_b21645 0.70 -1.7 1,674,954 + SM_b21645 0.76 +0.7 1,674,955 - SM_b21645 0.76 -0.2
Or see this region's nucleotide sequence