Experiment: Cisplatin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21474 and SM_b21475 are separated by 316 nucleotides SM_b21475 and SM_b21476 overlap by 1 nucleotides SM_b21476 and SM_b21477 overlap by 48 nucleotides
SM_b21474: SM_b21474 - 3-ketoacyl-ACP reductase, at 1,399,297 to 1,400,079
_b21474
SM_b21475: SM_b21475 - hypothetical protein, at 1,400,396 to 1,400,599
_b21475
SM_b21476: SM_b21476 - hypothetical protein, at 1,400,599 to 1,400,946
_b21476
SM_b21477: SM_b21477 - reverse transcriptasematurase, at 1,400,899 to 1,402,077
_b21477
Position (kb)
1400
1401 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1399.765 kb on + strand, within SM_b21474 at 1399.824 kb on + strand, within SM_b21474 at 1399.950 kb on + strand, within SM_b21474 at 1399.951 kb on - strand, within SM_b21474 at 1399.951 kb on - strand, within SM_b21474 at 1400.120 kb on + strand at 1400.120 kb on + strand at 1400.165 kb on - strand at 1400.165 kb on - strand at 1400.166 kb on + strand at 1400.167 kb on - strand at 1400.167 kb on - strand at 1400.167 kb on - strand at 1400.171 kb on + strand at 1400.171 kb on + strand at 1400.171 kb on + strand at 1400.210 kb on + strand at 1400.416 kb on + strand at 1400.557 kb on - strand, within SM_b21475 at 1400.597 kb on + strand at 1400.597 kb on + strand at 1400.597 kb on + strand at 1400.657 kb on + strand, within SM_b21476 at 1400.658 kb on - strand, within SM_b21476 at 1400.697 kb on + strand, within SM_b21476 at 1400.698 kb on - strand, within SM_b21476 at 1400.715 kb on - strand, within SM_b21476
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.001 mg/ml remove 1,399,765 + SM_b21474 0.60 +0.0 1,399,824 + SM_b21474 0.67 -2.3 1,399,950 + SM_b21474 0.83 +0.4 1,399,951 - SM_b21474 0.84 -0.2 1,399,951 - SM_b21474 0.84 +1.6 1,400,120 + -0.5 1,400,120 + +0.4 1,400,165 - -1.1 1,400,165 - +1.9 1,400,166 + -2.1 1,400,167 - -0.3 1,400,167 - +0.2 1,400,167 - +0.2 1,400,171 + -0.3 1,400,171 + +0.1 1,400,171 + -2.1 1,400,210 + +0.0 1,400,416 + -1.2 1,400,557 - SM_b21475 0.79 +0.6 1,400,597 + -2.3 1,400,597 + -0.9 1,400,597 + +0.1 1,400,657 + SM_b21476 0.17 -2.0 1,400,658 - SM_b21476 0.17 -1.0 1,400,697 + SM_b21476 0.28 +1.0 1,400,698 - SM_b21476 0.28 +0.3 1,400,715 - SM_b21476 0.33 -0.7
Or see this region's nucleotide sequence