Strain Fitness in Sinorhizobium meliloti 1021 around SM_b21454
Experiment: Cisplatin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,380,982 | + | +1.4 | |||
1,380,982 | + | +0.7 | |||
1,380,983 | - | -1.1 | |||
1,381,000 | + | -0.3 | |||
1,381,001 | - | +0.1 | |||
1,381,001 | - | -0.4 | |||
1,381,001 | - | -0.3 | |||
1,381,001 | - | -0.4 | |||
1,381,048 | + | -2.5 | |||
1,381,049 | - | +0.3 | |||
1,381,063 | + | +1.3 | |||
1,381,063 | + | +1.2 | |||
1,381,064 | - | +1.2 | |||
1,381,064 | - | -0.1 | |||
1,381,178 | + | SM_b21452 | 0.28 | -1.4 | |
1,381,178 | + | SM_b21452 | 0.28 | +1.7 | |
1,381,179 | - | SM_b21452 | 0.28 | +1.5 | |
1,381,179 | - | SM_b21452 | 0.28 | +1.3 | |
1,381,737 | + | +0.8 | |||
1,381,738 | - | -0.4 | |||
1,381,738 | - | +0.1 | |||
1,381,738 | - | -0.1 | |||
1,381,811 | + | -1.1 | |||
1,381,812 | - | -2.1 | |||
1,382,075 | - | SM_b21454 | 0.80 | -1.5 | |
1,382,177 | - | -0.9 | |||
1,382,185 | - | +0.4 | |||
1,382,203 | - | -0.8 | |||
1,382,203 | - | +0.4 | |||
1,382,278 | + | SM_b21455 | 0.10 | +0.6 | |
1,382,279 | - | SM_b21455 | 0.10 | -2.4 | |
1,382,355 | - | SM_b21455 | 0.16 | +0.4 | |
1,383,056 | + | SM_b21455 | 0.67 | +0.3 |
Or see this region's nucleotide sequence