Experiment: Cisplatin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21355 and SM_b21356 are separated by 94 nucleotides SM_b21356 and SM_b21357 are separated by 97 nucleotides SM_b21357 and SM_b21358 are separated by 52 nucleotides
SM_b21355: SM_b21355 - oxidoreductase, at 1,021,063 to 1,022,082
_b21355
SM_b21356: SM_b21356 - hypothetical protein, at 1,022,177 to 1,023,169
_b21356
SM_b21357: SM_b21357 - hypothetical protein, at 1,023,267 to 1,023,785
_b21357
SM_b21358: SM_b21358 - hypothetical protein, at 1,023,838 to 1,024,332
_b21358
Position (kb)
1022
1023
1024 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1021.207 kb on + strand, within SM_b21355 at 1021.274 kb on + strand, within SM_b21355 at 1021.274 kb on + strand, within SM_b21355 at 1021.275 kb on - strand, within SM_b21355 at 1021.413 kb on - strand, within SM_b21355 at 1021.543 kb on + strand, within SM_b21355 at 1021.543 kb on + strand, within SM_b21355 at 1021.544 kb on - strand, within SM_b21355 at 1021.544 kb on - strand, within SM_b21355 at 1021.611 kb on - strand, within SM_b21355 at 1021.666 kb on + strand, within SM_b21355 at 1021.667 kb on - strand, within SM_b21355 at 1021.796 kb on + strand, within SM_b21355 at 1021.797 kb on - strand, within SM_b21355 at 1021.802 kb on + strand, within SM_b21355 at 1021.803 kb on - strand, within SM_b21355 at 1021.803 kb on - strand, within SM_b21355 at 1022.105 kb on + strand at 1022.105 kb on + strand at 1022.106 kb on - strand at 1022.125 kb on - strand at 1022.335 kb on - strand, within SM_b21356 at 1022.346 kb on + strand, within SM_b21356 at 1022.346 kb on + strand, within SM_b21356 at 1022.347 kb on - strand, within SM_b21356 at 1022.347 kb on - strand, within SM_b21356 at 1022.347 kb on - strand, within SM_b21356 at 1022.347 kb on - strand, within SM_b21356 at 1022.354 kb on + strand, within SM_b21356 at 1022.355 kb on - strand, within SM_b21356 at 1022.739 kb on + strand at 1022.748 kb on - strand, within SM_b21356 at 1022.902 kb on + strand, within SM_b21356 at 1022.942 kb on + strand, within SM_b21356 at 1022.943 kb on - strand, within SM_b21356 at 1022.966 kb on + strand, within SM_b21356 at 1022.966 kb on + strand, within SM_b21356 at 1022.967 kb on - strand, within SM_b21356 at 1022.967 kb on - strand, within SM_b21356 at 1022.979 kb on - strand, within SM_b21356 at 1023.220 kb on + strand at 1023.261 kb on + strand at 1023.262 kb on - strand at 1023.262 kb on - strand at 1023.376 kb on + strand, within SM_b21357 at 1023.376 kb on + strand, within SM_b21357 at 1023.376 kb on + strand, within SM_b21357 at 1023.376 kb on + strand, within SM_b21357 at 1023.377 kb on - strand, within SM_b21357 at 1023.377 kb on - strand, within SM_b21357 at 1023.428 kb on + strand, within SM_b21357 at 1023.429 kb on - strand, within SM_b21357 at 1023.429 kb on - strand, within SM_b21357 at 1023.637 kb on + strand, within SM_b21357 at 1023.637 kb on + strand, within SM_b21357 at 1023.638 kb on - strand, within SM_b21357 at 1023.700 kb on - strand, within SM_b21357 at 1023.783 kb on + strand at 1023.783 kb on + strand at 1023.783 kb on + strand at 1023.844 kb on + strand at 1023.859 kb on + strand at 1023.860 kb on - strand at 1024.046 kb on + strand, within SM_b21358 at 1024.046 kb on + strand, within SM_b21358 at 1024.046 kb on + strand, within SM_b21358 at 1024.046 kb on + strand, within SM_b21358 at 1024.046 kb on + strand, within SM_b21358 at 1024.047 kb on - strand, within SM_b21358 at 1024.047 kb on - strand at 1024.047 kb on - strand, within SM_b21358
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.001 mg/ml remove 1,021,207 + SM_b21355 0.14 -0.9 1,021,274 + SM_b21355 0.21 -1.8 1,021,274 + SM_b21355 0.21 +1.9 1,021,275 - SM_b21355 0.21 +0.5 1,021,413 - SM_b21355 0.34 +1.5 1,021,543 + SM_b21355 0.47 -0.2 1,021,543 + SM_b21355 0.47 +0.5 1,021,544 - SM_b21355 0.47 -0.1 1,021,544 - SM_b21355 0.47 +0.2 1,021,611 - SM_b21355 0.54 +0.3 1,021,666 + SM_b21355 0.59 +0.4 1,021,667 - SM_b21355 0.59 +1.4 1,021,796 + SM_b21355 0.72 +0.6 1,021,797 - SM_b21355 0.72 -2.8 1,021,802 + SM_b21355 0.72 +0.2 1,021,803 - SM_b21355 0.73 +0.2 1,021,803 - SM_b21355 0.73 +0.0 1,022,105 + -0.8 1,022,105 + +0.6 1,022,106 - -1.0 1,022,125 - -0.3 1,022,335 - SM_b21356 0.16 -0.9 1,022,346 + SM_b21356 0.17 -0.5 1,022,346 + SM_b21356 0.17 +0.1 1,022,347 - SM_b21356 0.17 +0.7 1,022,347 - SM_b21356 0.17 -0.1 1,022,347 - SM_b21356 0.17 +0.5 1,022,347 - SM_b21356 0.17 +1.4 1,022,354 + SM_b21356 0.18 -0.2 1,022,355 - SM_b21356 0.18 -3.5 1,022,739 + -0.8 1,022,748 - SM_b21356 0.58 -3.1 1,022,902 + SM_b21356 0.73 +0.4 1,022,942 + SM_b21356 0.77 +1.4 1,022,943 - SM_b21356 0.77 +0.5 1,022,966 + SM_b21356 0.79 +0.6 1,022,966 + SM_b21356 0.79 -0.4 1,022,967 - SM_b21356 0.80 -1.4 1,022,967 - SM_b21356 0.80 +0.4 1,022,979 - SM_b21356 0.81 +0.9 1,023,220 + -0.1 1,023,261 + +0.5 1,023,262 - +1.2 1,023,262 - -1.2 1,023,376 + SM_b21357 0.21 -2.3 1,023,376 + SM_b21357 0.21 +0.4 1,023,376 + SM_b21357 0.21 +0.3 1,023,376 + SM_b21357 0.21 -0.5 1,023,377 - SM_b21357 0.21 -0.9 1,023,377 - SM_b21357 0.21 -2.6 1,023,428 + SM_b21357 0.31 +0.4 1,023,429 - SM_b21357 0.31 +0.4 1,023,429 - SM_b21357 0.31 -0.5 1,023,637 + SM_b21357 0.71 -0.6 1,023,637 + SM_b21357 0.71 +0.6 1,023,638 - SM_b21357 0.71 -1.2 1,023,700 - SM_b21357 0.83 -0.7 1,023,783 + +0.3 1,023,783 + -1.7 1,023,783 + -0.1 1,023,844 + -0.0 1,023,859 + +0.1 1,023,860 - -1.4 1,024,046 + SM_b21358 0.42 +0.2 1,024,046 + SM_b21358 0.42 -1.2 1,024,046 + SM_b21358 0.42 -1.4 1,024,046 + SM_b21358 0.42 -0.4 1,024,046 + SM_b21358 0.42 -1.5 1,024,047 - SM_b21358 0.42 -0.9 1,024,047 - -0.4 1,024,047 - SM_b21358 0.42 -0.8
Or see this region's nucleotide sequence