Experiment: Cisplatin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21330 and SM_b21331 are separated by 231 nucleotides SM_b21331 and SM_b21332 are separated by 273 nucleotides SM_b21332 and SM_b21333 are separated by 54 nucleotides SM_b21333 and SM_b21334 are separated by 148 nucleotides
SM_b21330: SM_b21330 - hypothetical protein, at 998,537 to 998,746
_b21330
SM_b21331: SM_b21331 - hypothetical protein, at 998,978 to 999,298
_b21331
SM_b21332: SM_b21332 - hypothetical protein, at 999,572 to 1,000,069
_b21332
SM_b21333: SM_b21333 - hypothetical protein, at 1,000,124 to 1,000,483
_b21333
SM_b21334: SM_b21334 - hypothetical protein, at 1,000,632 to 1,001,393
_b21334
Position (kb) 999
1000
1001 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 998.697 kb on + strand, within SM_b21330 at 998.698 kb on - strand, within SM_b21330 at 998.720 kb on + strand, within SM_b21330 at 998.836 kb on + strand at 998.837 kb on - strand at 998.887 kb on + strand at 998.887 kb on + strand at 998.887 kb on + strand at 998.887 kb on + strand at 998.888 kb on - strand at 998.888 kb on - strand at 998.888 kb on - strand at 999.011 kb on - strand, within SM_b21331 at 999.011 kb on - strand, within SM_b21331 at 999.248 kb on + strand, within SM_b21331 at 999.248 kb on + strand, within SM_b21331 at 999.249 kb on - strand, within SM_b21331 at 999.250 kb on + strand, within SM_b21331 at 999.344 kb on - strand at 999.344 kb on - strand at 999.500 kb on + strand at 999.501 kb on - strand at 999.627 kb on - strand, within SM_b21332 at 999.627 kb on - strand, within SM_b21332 at 999.680 kb on - strand, within SM_b21332 at 999.707 kb on + strand, within SM_b21332 at 999.708 kb on - strand, within SM_b21332 at 999.708 kb on - strand, within SM_b21332 at 999.708 kb on - strand, within SM_b21332 at 1000.141 kb on - strand at 1000.141 kb on - strand at 1000.141 kb on - strand at 1000.358 kb on + strand, within SM_b21333 at 1000.481 kb on + strand at 1000.486 kb on + strand at 1000.517 kb on - strand at 1000.546 kb on + strand at 1000.546 kb on + strand at 1000.547 kb on - strand at 1000.646 kb on + strand at 1000.667 kb on - strand at 1000.667 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.001 mg/ml remove 998,697 + SM_b21330 0.76 -0.5 998,698 - SM_b21330 0.77 +0.3 998,720 + SM_b21330 0.87 -0.1 998,836 + -0.9 998,837 - -1.5 998,887 + -1.9 998,887 + -0.1 998,887 + -2.9 998,887 + -0.6 998,888 - -1.9 998,888 - +0.1 998,888 - -2.6 999,011 - SM_b21331 0.10 -0.9 999,011 - SM_b21331 0.10 +0.7 999,248 + SM_b21331 0.84 +0.7 999,248 + SM_b21331 0.84 -0.4 999,249 - SM_b21331 0.84 +0.7 999,250 + SM_b21331 0.85 -0.1 999,344 - -2.3 999,344 - -0.1 999,500 + +0.3 999,501 - -0.4 999,627 - SM_b21332 0.11 -0.6 999,627 - SM_b21332 0.11 +0.8 999,680 - SM_b21332 0.22 +1.1 999,707 + SM_b21332 0.27 +1.3 999,708 - SM_b21332 0.27 -0.3 999,708 - SM_b21332 0.27 +0.9 999,708 - SM_b21332 0.27 +0.9 1,000,141 - -0.8 1,000,141 - -0.9 1,000,141 - +2.4 1,000,358 + SM_b21333 0.65 -0.2 1,000,481 + -0.1 1,000,486 + -0.5 1,000,517 - -0.5 1,000,546 + -1.0 1,000,546 + +0.2 1,000,547 - -0.6 1,000,646 + +0.4 1,000,667 - +2.5 1,000,667 - -4.2
Or see this region's nucleotide sequence