Experiment: Cisplatin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21278 and SM_b21279 are separated by 6 nucleotides SM_b21279 and SM_b21280 are separated by 151 nucleotides
SM_b21278: SM_b21278 - adenine deaminase, at 851,706 to 853,487
_b21278
SM_b21279: SM_b21279 - amidohydrolase, at 853,494 to 854,663
_b21279
SM_b21280: SM_b21280 - phosphoribosyltransferase, at 854,815 to 855,525
_b21280
Position (kb) 853
854
855 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 852.521 kb on + strand, within SM_b21278 at 852.557 kb on + strand, within SM_b21278 at 852.983 kb on + strand, within SM_b21278 at 852.984 kb on - strand, within SM_b21278 at 853.014 kb on - strand, within SM_b21278 at 853.014 kb on - strand, within SM_b21278 at 853.247 kb on - strand, within SM_b21278 at 853.360 kb on - strand at 853.441 kb on + strand at 853.442 kb on - strand at 853.570 kb on + strand at 853.581 kb on - strand at 853.627 kb on + strand, within SM_b21279 at 853.627 kb on + strand, within SM_b21279 at 853.628 kb on - strand, within SM_b21279 at 853.628 kb on - strand, within SM_b21279 at 853.628 kb on - strand, within SM_b21279 at 853.775 kb on + strand, within SM_b21279 at 853.775 kb on + strand, within SM_b21279 at 853.775 kb on + strand, within SM_b21279 at 853.776 kb on - strand, within SM_b21279 at 853.792 kb on + strand, within SM_b21279 at 853.810 kb on + strand, within SM_b21279 at 853.810 kb on + strand, within SM_b21279 at 853.811 kb on - strand, within SM_b21279 at 853.811 kb on - strand, within SM_b21279 at 853.811 kb on - strand, within SM_b21279 at 853.811 kb on - strand, within SM_b21279 at 853.878 kb on - strand, within SM_b21279 at 853.880 kb on - strand, within SM_b21279 at 854.189 kb on - strand, within SM_b21279 at 854.345 kb on + strand, within SM_b21279 at 854.814 kb on + strand at 854.815 kb on - strand at 854.848 kb on + strand at 855.146 kb on - strand, within SM_b21280 at 855.210 kb on + strand, within SM_b21280 at 855.211 kb on - strand, within SM_b21280 at 855.211 kb on - strand, within SM_b21280 at 855.242 kb on - strand, within SM_b21280 at 855.452 kb on + strand, within SM_b21280 at 855.453 kb on - strand, within SM_b21280 at 855.453 kb on - strand, within SM_b21280 at 855.523 kb on + strand at 855.523 kb on + strand at 855.524 kb on - strand at 855.524 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.001 mg/ml remove 852,521 + SM_b21278 0.46 +0.6 852,557 + SM_b21278 0.48 +0.6 852,983 + SM_b21278 0.72 +0.6 852,984 - SM_b21278 0.72 -0.7 853,014 - SM_b21278 0.73 +0.0 853,014 - SM_b21278 0.73 -0.3 853,247 - SM_b21278 0.86 -3.4 853,360 - -0.3 853,441 + +2.4 853,442 - -0.3 853,570 + -0.5 853,581 - -2.5 853,627 + SM_b21279 0.11 +0.7 853,627 + SM_b21279 0.11 +0.5 853,628 - SM_b21279 0.11 -2.1 853,628 - SM_b21279 0.11 -0.2 853,628 - SM_b21279 0.11 +1.6 853,775 + SM_b21279 0.24 -0.6 853,775 + SM_b21279 0.24 -0.4 853,775 + SM_b21279 0.24 -3.0 853,776 - SM_b21279 0.24 -0.9 853,792 + SM_b21279 0.25 -0.9 853,810 + SM_b21279 0.27 -0.3 853,810 + SM_b21279 0.27 +1.1 853,811 - SM_b21279 0.27 +0.3 853,811 - SM_b21279 0.27 +0.2 853,811 - SM_b21279 0.27 -1.6 853,811 - SM_b21279 0.27 -0.1 853,878 - SM_b21279 0.33 -1.9 853,880 - SM_b21279 0.33 -0.1 854,189 - SM_b21279 0.59 -1.1 854,345 + SM_b21279 0.73 -1.0 854,814 + +0.2 854,815 - -0.1 854,848 + +0.4 855,146 - SM_b21280 0.47 -1.5 855,210 + SM_b21280 0.56 +0.5 855,211 - SM_b21280 0.56 -2.6 855,211 - SM_b21280 0.56 -0.1 855,242 - SM_b21280 0.60 -0.3 855,452 + SM_b21280 0.90 +0.4 855,453 - SM_b21280 0.90 +0.2 855,453 - SM_b21280 0.90 -1.2 855,523 + +0.0 855,523 + +0.4 855,524 - -1.6 855,524 - +0.8
Or see this region's nucleotide sequence