Experiment: Cisplatin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21223 and SM_b21224 overlap by 1 nucleotides SM_b21224 and SM_b21225 overlap by 4 nucleotides SM_b21225 and SM_b21226 are separated by 46 nucleotides
SM_b21223: SM_b21223 - sulfate adenylyltransferase subunit 2, at 786,637 to 787,536
_b21223
SM_b21224: SM_b21224 - bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase, at 787,536 to 789,437
_b21224
SM_b21225: SM_b21225 - inositol monophosphatase, at 789,434 to 790,273
_b21225
SM_b21226: SM_b21226 - hypothetical protein, at 790,320 to 791,060
_b21226
Position (kb) 787
788
789
790 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 788.490 kb on - strand, within SM_b21224 at 788.490 kb on - strand, within SM_b21224 at 788.490 kb on - strand, within SM_b21224 at 788.490 kb on - strand, within SM_b21224 at 789.010 kb on - strand, within SM_b21224 at 789.010 kb on - strand, within SM_b21224 at 789.220 kb on + strand, within SM_b21224 at 789.273 kb on + strand at 789.316 kb on + strand at 789.356 kb on + strand at 789.356 kb on + strand at 789.357 kb on - strand at 789.357 kb on - strand at 789.358 kb on + strand at 789.359 kb on - strand at 789.359 kb on - strand at 789.359 kb on - strand at 789.359 kb on - strand at 789.500 kb on + strand at 789.500 kb on + strand at 789.809 kb on + strand, within SM_b21225 at 789.810 kb on - strand, within SM_b21225 at 789.984 kb on - strand, within SM_b21225 at 790.043 kb on + strand, within SM_b21225 at 790.044 kb on - strand, within SM_b21225 at 790.259 kb on + strand at 790.260 kb on - strand at 790.339 kb on + strand at 790.339 kb on + strand at 790.340 kb on - strand at 790.340 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.001 mg/ml remove 788,490 - SM_b21224 0.50 -1.4 788,490 - SM_b21224 0.50 -1.0 788,490 - SM_b21224 0.50 -0.2 788,490 - SM_b21224 0.50 +0.2 789,010 - SM_b21224 0.77 -0.7 789,010 - SM_b21224 0.77 +0.5 789,220 + SM_b21224 0.89 -1.2 789,273 + -0.7 789,316 + +0.2 789,356 + -0.1 789,356 + -0.0 789,357 - -1.3 789,357 - -0.7 789,358 + +0.9 789,359 - -0.7 789,359 - -0.6 789,359 - -2.1 789,359 - +0.5 789,500 + -2.2 789,500 + -2.7 789,809 + SM_b21225 0.45 -0.9 789,810 - SM_b21225 0.45 +0.3 789,984 - SM_b21225 0.65 -0.5 790,043 + SM_b21225 0.72 -0.6 790,044 - SM_b21225 0.73 +1.4 790,259 + -0.7 790,260 - +1.6 790,339 + -3.0 790,339 + -0.8 790,340 - +0.6 790,340 - +2.2
Or see this region's nucleotide sequence