Experiment: Cisplatin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21167 and SM_b21168 are separated by 176 nucleotides SM_b21168 and SM_b21169 are separated by 35 nucleotides SM_b21169 and SM_b21170 are separated by 19 nucleotides
SM_b21167: SM_b21167 - reverse transcriptasematurase, at 913,644 to 915,005
_b21167
SM_b21168: SM_b21168 - integral membrane transporter protein, at 915,182 to 916,366
_b21168
SM_b21169: SM_b21169 - ArsR family transcriptional regulator, at 916,402 to 916,827
_b21169
SM_b21170: SM_b21170 - guanylate kinase, at 916,847 to 917,434
_b21170
Position (kb) 915
916
917 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 914.503 kb on + strand, within SM_b21167 at 914.503 kb on + strand, within SM_b21167 at 914.503 kb on + strand, within SM_b21167 at 914.504 kb on + strand, within SM_b21167 at 914.504 kb on - strand, within SM_b21167 at 914.504 kb on - strand, within SM_b21167 at 914.711 kb on - strand, within SM_b21167 at 915.060 kb on + strand at 915.060 kb on + strand at 915.060 kb on + strand at 915.060 kb on + strand at 915.060 kb on + strand at 915.165 kb on + strand at 915.166 kb on - strand at 915.349 kb on - strand, within SM_b21168 at 915.465 kb on - strand, within SM_b21168 at 915.597 kb on + strand, within SM_b21168 at 915.598 kb on - strand, within SM_b21168 at 915.705 kb on + strand, within SM_b21168 at 915.705 kb on + strand, within SM_b21168 at 915.736 kb on - strand, within SM_b21168 at 916.136 kb on + strand, within SM_b21168 at 916.137 kb on - strand, within SM_b21168 at 916.216 kb on - strand, within SM_b21168 at 916.327 kb on + strand at 916.327 kb on + strand at 916.328 kb on - strand at 916.442 kb on + strand at 916.505 kb on + strand, within SM_b21169 at 916.505 kb on + strand, within SM_b21169 at 916.505 kb on + strand, within SM_b21169 at 916.505 kb on + strand, within SM_b21169 at 916.506 kb on - strand, within SM_b21169 at 916.614 kb on + strand, within SM_b21169 at 916.614 kb on + strand, within SM_b21169 at 916.614 kb on + strand, within SM_b21169 at 916.615 kb on - strand, within SM_b21169 at 916.621 kb on + strand, within SM_b21169 at 916.621 kb on + strand, within SM_b21169 at 916.622 kb on - strand at 916.622 kb on - strand, within SM_b21169 at 916.622 kb on - strand, within SM_b21169 at 916.622 kb on - strand at 916.622 kb on - strand, within SM_b21169 at 916.622 kb on - strand, within SM_b21169 at 916.622 kb on - strand, within SM_b21169 at 916.659 kb on + strand, within SM_b21169 at 916.660 kb on - strand, within SM_b21169 at 916.660 kb on - strand, within SM_b21169 at 916.743 kb on + strand, within SM_b21169 at 916.867 kb on + strand at 916.867 kb on + strand at 917.081 kb on - strand, within SM_b21170 at 917.127 kb on - strand, within SM_b21170 at 917.181 kb on + strand, within SM_b21170 at 917.182 kb on - strand, within SM_b21170 at 917.182 kb on - strand, within SM_b21170
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.001 mg/ml remove 914,503 + SM_b21167 0.63 -0.4 914,503 + SM_b21167 0.63 -1.4 914,503 + SM_b21167 0.63 -0.5 914,504 + SM_b21167 0.63 +1.2 914,504 - SM_b21167 0.63 -1.2 914,504 - SM_b21167 0.63 +0.6 914,711 - SM_b21167 0.78 -1.6 915,060 + -0.1 915,060 + +0.5 915,060 + -0.7 915,060 + -0.9 915,060 + +0.8 915,165 + -0.4 915,166 - +0.7 915,349 - SM_b21168 0.14 -1.0 915,465 - SM_b21168 0.24 +0.2 915,597 + SM_b21168 0.35 +0.2 915,598 - SM_b21168 0.35 +0.1 915,705 + SM_b21168 0.44 +0.5 915,705 + SM_b21168 0.44 +0.2 915,736 - SM_b21168 0.47 +0.7 916,136 + SM_b21168 0.81 +0.5 916,137 - SM_b21168 0.81 -0.6 916,216 - SM_b21168 0.87 -0.4 916,327 + -3.6 916,327 + -0.2 916,328 - -0.3 916,442 + -0.1 916,505 + SM_b21169 0.24 -1.1 916,505 + SM_b21169 0.24 -2.5 916,505 + SM_b21169 0.24 -0.3 916,505 + SM_b21169 0.24 +0.8 916,506 - SM_b21169 0.24 +0.1 916,614 + SM_b21169 0.50 +0.7 916,614 + SM_b21169 0.50 -0.2 916,614 + SM_b21169 0.50 +0.5 916,615 - SM_b21169 0.50 -1.8 916,621 + SM_b21169 0.51 +0.6 916,621 + SM_b21169 0.51 +0.2 916,622 - +2.5 916,622 - SM_b21169 0.52 -0.7 916,622 - SM_b21169 0.52 +0.2 916,622 - +0.6 916,622 - SM_b21169 0.52 +0.9 916,622 - SM_b21169 0.52 -0.0 916,622 - SM_b21169 0.52 -0.4 916,659 + SM_b21169 0.60 +0.0 916,660 - SM_b21169 0.61 +0.8 916,660 - SM_b21169 0.61 +2.7 916,743 + SM_b21169 0.80 -0.8 916,867 + +1.5 916,867 + +1.4 917,081 - SM_b21170 0.40 +0.9 917,127 - SM_b21170 0.48 +0.8 917,181 + SM_b21170 0.57 +1.6 917,182 - SM_b21170 0.57 +3.1 917,182 - SM_b21170 0.57 +1.1
Or see this region's nucleotide sequence