Experiment: Cisplatin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21163 and SM_b21164 are separated by 2 nucleotides SM_b21164 and SM_b21165 are separated by 1 nucleotides SM_b21165 and SM_b21166 overlap by 4 nucleotides
SM_b21163: SM_b21163 - Urocanate hydratase (EC 4.2.1.49) (from data) , at 908,169 to 909,842
_b21163
SM_b21164: SM_b21164 - N-formylglutamate deformylase (EC 3.5.1.68) (from data) , at 909,845 to 910,660
_b21164
SM_b21165: SM_b21165 - Histidine ammonia-lyase (EC 4.3.1.3) (from data) , at 910,662 to 912,197
_b21165
SM_b21166: SM_b21166 - Imidazolonepropionase (EC 3.5.2.7) (from data) , at 912,194 to 913,609
_b21166
Position (kb)
910
911
912
913 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 909.691 kb on + strand at 909.821 kb on + strand at 909.822 kb on - strand at 910.154 kb on - strand, within SM_b21164 at 910.325 kb on + strand, within SM_b21164 at 910.326 kb on - strand, within SM_b21164 at 910.326 kb on - strand, within SM_b21164 at 910.364 kb on - strand, within SM_b21164 at 910.454 kb on + strand, within SM_b21164 at 910.455 kb on - strand, within SM_b21164 at 910.455 kb on - strand, within SM_b21164 at 910.455 kb on - strand, within SM_b21164 at 910.455 kb on - strand, within SM_b21164 at 910.513 kb on - strand, within SM_b21164 at 910.759 kb on + strand at 910.759 kb on + strand at 910.759 kb on + strand at 911.104 kb on + strand, within SM_b21165 at 911.359 kb on + strand, within SM_b21165 at 911.359 kb on + strand, within SM_b21165 at 911.359 kb on + strand, within SM_b21165 at 911.360 kb on - strand, within SM_b21165 at 911.360 kb on - strand, within SM_b21165 at 911.459 kb on + strand, within SM_b21165 at 911.744 kb on + strand, within SM_b21165 at 911.745 kb on - strand, within SM_b21165 at 911.745 kb on - strand, within SM_b21165 at 911.938 kb on - strand, within SM_b21165 at 912.040 kb on + strand, within SM_b21165 at 912.142 kb on + strand at 912.142 kb on + strand at 912.143 kb on - strand at 912.255 kb on + strand at 912.543 kb on + strand, within SM_b21166 at 912.616 kb on - strand, within SM_b21166 at 912.645 kb on + strand, within SM_b21166 at 912.850 kb on - strand, within SM_b21166 at 912.900 kb on + strand, within SM_b21166 at 912.900 kb on + strand, within SM_b21166 at 912.998 kb on - strand, within SM_b21166 at 913.137 kb on + strand, within SM_b21166 at 913.138 kb on - strand, within SM_b21166 at 913.195 kb on + strand, within SM_b21166 at 913.195 kb on + strand, within SM_b21166
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.001 mg/ml remove 909,691 + +0.1 909,821 + -0.0 909,822 - +0.6 910,154 - SM_b21164 0.38 +1.0 910,325 + SM_b21164 0.59 +1.5 910,326 - SM_b21164 0.59 +0.9 910,326 - SM_b21164 0.59 +0.2 910,364 - SM_b21164 0.64 +0.0 910,454 + SM_b21164 0.75 -2.2 910,455 - SM_b21164 0.75 +0.1 910,455 - SM_b21164 0.75 +0.3 910,455 - SM_b21164 0.75 +0.3 910,455 - SM_b21164 0.75 +0.1 910,513 - SM_b21164 0.82 +1.1 910,759 + -0.2 910,759 + -0.1 910,759 + -2.3 911,104 + SM_b21165 0.29 -0.2 911,359 + SM_b21165 0.45 -0.6 911,359 + SM_b21165 0.45 -1.7 911,359 + SM_b21165 0.45 +0.4 911,360 - SM_b21165 0.45 +1.1 911,360 - SM_b21165 0.45 +0.7 911,459 + SM_b21165 0.52 -0.9 911,744 + SM_b21165 0.70 -2.4 911,745 - SM_b21165 0.71 +0.2 911,745 - SM_b21165 0.71 -0.3 911,938 - SM_b21165 0.83 +0.6 912,040 + SM_b21165 0.90 +1.1 912,142 + -3.4 912,142 + +0.4 912,143 - -2.9 912,255 + +0.8 912,543 + SM_b21166 0.25 +0.3 912,616 - SM_b21166 0.30 +0.2 912,645 + SM_b21166 0.32 -0.2 912,850 - SM_b21166 0.46 +2.6 912,900 + SM_b21166 0.50 +0.9 912,900 + SM_b21166 0.50 -2.9 912,998 - SM_b21166 0.57 +1.3 913,137 + SM_b21166 0.67 +1.2 913,138 - SM_b21166 0.67 -0.2 913,195 + SM_b21166 0.71 -0.4 913,195 + SM_b21166 0.71 -2.0
Or see this region's nucleotide sequence