Experiment: Cisplatin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21152 and SM_b21153 are separated by 2 nucleotides SM_b21153 and SM_b21154 are separated by 150 nucleotides SM_b21154 and SM_b21155 are separated by 80 nucleotides
SM_b21152: SM_b21152 - sugar uptake ABC transporter ATP-binding protein, at 896,873 to 898,006
_b21152
SM_b21153: SM_b21153 - acetyltransferase, at 898,009 to 898,509
_b21153
SM_b21154: SM_b21154 - hypothetical protein, at 898,660 to 899,043
_b21154
SM_b21155: SM_b21155 - hypothetical protein, at 899,124 to 900,617
_b21155
Position (kb)
898
899
900 Strain fitness (log2 ratio)
-2
-1
0
1 at 897.706 kb on - strand, within SM_b21152 at 897.777 kb on + strand, within SM_b21152 at 897.809 kb on + strand, within SM_b21152 at 897.810 kb on - strand, within SM_b21152 at 897.810 kb on - strand, within SM_b21152 at 897.839 kb on + strand, within SM_b21152 at 897.839 kb on + strand, within SM_b21152 at 897.840 kb on - strand, within SM_b21152 at 897.840 kb on - strand, within SM_b21152 at 898.004 kb on + strand at 898.005 kb on - strand at 898.270 kb on + strand, within SM_b21153 at 898.271 kb on - strand, within SM_b21153 at 898.687 kb on + strand at 898.687 kb on + strand at 898.687 kb on + strand at 898.687 kb on + strand at 898.687 kb on + strand at 898.688 kb on - strand at 898.688 kb on - strand at 898.688 kb on - strand at 898.688 kb on - strand at 898.688 kb on - strand at 898.688 kb on - strand at 899.015 kb on + strand at 899.015 kb on + strand at 899.015 kb on + strand at 899.116 kb on + strand at 899.117 kb on - strand at 899.239 kb on + strand at 899.240 kb on - strand at 899.687 kb on + strand, within SM_b21155 at 899.697 kb on - strand, within SM_b21155 at 899.776 kb on + strand, within SM_b21155 at 899.776 kb on + strand, within SM_b21155 at 899.776 kb on + strand, within SM_b21155 at 899.777 kb on - strand, within SM_b21155 at 900.006 kb on + strand, within SM_b21155
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.001 mg/ml remove 897,706 - SM_b21152 0.73 -0.8 897,777 + SM_b21152 0.80 -2.5 897,809 + SM_b21152 0.83 -0.8 897,810 - SM_b21152 0.83 +1.0 897,810 - SM_b21152 0.83 -0.5 897,839 + SM_b21152 0.85 +0.2 897,839 + SM_b21152 0.85 +0.2 897,840 - SM_b21152 0.85 -0.0 897,840 - SM_b21152 0.85 +0.2 898,004 + -0.1 898,005 - -0.5 898,270 + SM_b21153 0.52 -1.6 898,271 - SM_b21153 0.52 +0.2 898,687 + -0.5 898,687 + -0.2 898,687 + -0.7 898,687 + +0.4 898,687 + -2.2 898,688 - +1.4 898,688 - -1.5 898,688 - -1.0 898,688 - -0.6 898,688 - -0.5 898,688 - -0.3 899,015 + +0.9 899,015 + +0.8 899,015 + +0.2 899,116 + -1.7 899,117 - -1.0 899,239 + -0.1 899,240 - -0.7 899,687 + SM_b21155 0.38 +0.7 899,697 - SM_b21155 0.38 -0.3 899,776 + SM_b21155 0.44 -1.7 899,776 + SM_b21155 0.44 -0.9 899,776 + SM_b21155 0.44 +0.5 899,777 - SM_b21155 0.44 +1.1 900,006 + SM_b21155 0.59 -1.7
Or see this region's nucleotide sequence