Experiment: Cisplatin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21124 and SM_b21125 overlap by 4 nucleotides SM_b21125 and SM_b21126 overlap by 4 nucleotides SM_b21126 and SM_b21127 are separated by 76 nucleotides
SM_b21124: SM_b21124 - 3-methylcrotonyl-CoA carboxylase, alpha (biotin-containing) subunit (EC 6.4.1.4) <small>(from data)</small>, at 762,782 to 764,770
_b21124
SM_b21125: SM_b21125 - Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) <small>(from data)</small>, at 764,767 to 765,636
_b21125
SM_b21126: SM_b21126 - 3-methylglutaconyl-CoA hydratase (EC 4.2.1.18) <small>(from data)</small>, at 765,633 to 766,418
_b21126
SM_b21127: SM_b21127 - hypothetical protein, at 766,495 to 766,866
_b21127
Position (kb) 764
765
766 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 763.777 kb on + strand, within SM_b21124 at 763.778 kb on - strand, within SM_b21124 at 763.815 kb on - strand, within SM_b21124 at 763.815 kb on - strand, within SM_b21124 at 763.921 kb on + strand, within SM_b21124 at 763.937 kb on + strand, within SM_b21124 at 763.937 kb on + strand, within SM_b21124 at 763.965 kb on + strand, within SM_b21124 at 763.965 kb on + strand, within SM_b21124 at 763.966 kb on - strand, within SM_b21124 at 764.029 kb on - strand, within SM_b21124 at 764.105 kb on - strand, within SM_b21124 at 765.021 kb on + strand, within SM_b21125 at 765.021 kb on + strand, within SM_b21125 at 765.193 kb on + strand, within SM_b21125 at 765.193 kb on + strand, within SM_b21125 at 765.193 kb on + strand, within SM_b21125 at 765.194 kb on - strand, within SM_b21125 at 765.221 kb on - strand, within SM_b21125 at 765.221 kb on - strand, within SM_b21125 at 765.287 kb on - strand, within SM_b21125 at 765.402 kb on + strand, within SM_b21125 at 765.402 kb on + strand, within SM_b21125 at 765.403 kb on - strand, within SM_b21125 at 765.496 kb on + strand, within SM_b21125 at 765.526 kb on - strand, within SM_b21125 at 766.080 kb on + strand, within SM_b21126 at 766.081 kb on - strand, within SM_b21126 at 766.233 kb on + strand, within SM_b21126 at 766.233 kb on + strand, within SM_b21126 at 766.234 kb on - strand, within SM_b21126 at 766.327 kb on + strand, within SM_b21126
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.001 mg/ml remove 763,777 + SM_b21124 0.50 +1.5 763,778 - SM_b21124 0.50 +0.9 763,815 - SM_b21124 0.52 +1.4 763,815 - SM_b21124 0.52 +0.8 763,921 + SM_b21124 0.57 +0.4 763,937 + SM_b21124 0.58 -1.6 763,937 + SM_b21124 0.58 -3.7 763,965 + SM_b21124 0.59 +0.1 763,965 + SM_b21124 0.59 -1.5 763,966 - SM_b21124 0.60 -0.3 764,029 - SM_b21124 0.63 +3.4 764,105 - SM_b21124 0.67 +0.1 765,021 + SM_b21125 0.29 -2.0 765,021 + SM_b21125 0.29 -0.3 765,193 + SM_b21125 0.49 +1.1 765,193 + SM_b21125 0.49 +0.3 765,193 + SM_b21125 0.49 +0.5 765,194 - SM_b21125 0.49 -1.0 765,221 - SM_b21125 0.52 -1.3 765,221 - SM_b21125 0.52 +0.9 765,287 - SM_b21125 0.60 -1.3 765,402 + SM_b21125 0.73 +0.6 765,402 + SM_b21125 0.73 -2.5 765,403 - SM_b21125 0.73 -2.8 765,496 + SM_b21125 0.84 -0.1 765,526 - SM_b21125 0.87 -0.5 766,080 + SM_b21126 0.57 -1.1 766,081 - SM_b21126 0.57 -1.8 766,233 + SM_b21126 0.76 +0.3 766,233 + SM_b21126 0.76 +0.7 766,234 - SM_b21126 0.76 +0.9 766,327 + SM_b21126 0.88 +0.0
Or see this region's nucleotide sequence