Experiment: Cisplatin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21114 and SM_b21115 are separated by 25 nucleotides SM_b21115 and SM_b21116 are separated by 213 nucleotides
SM_b21114: SM_b21114 - nitrate transport protein, at 755,267 to 756,592
_b21114
SM_b21115: SM_b21115 - response regulator protein, at 756,618 to 757,106
_b21115
SM_b21116: SM_b21116 - trifolitoxin biosynthesis protein, at 757,320 to 758,051
_b21116
Position (kb) 756
757
758 Strain fitness (log2 ratio) -1
0
1
2
3
4
5 at 755.794 kb on + strand, within SM_b21114 at 756.045 kb on + strand, within SM_b21114 at 756.046 kb on - strand, within SM_b21114 at 756.050 kb on - strand, within SM_b21114 at 756.195 kb on + strand, within SM_b21114 at 756.196 kb on - strand, within SM_b21114 at 756.196 kb on - strand, within SM_b21114 at 756.569 kb on + strand at 756.569 kb on + strand at 756.569 kb on + strand at 756.569 kb on + strand at 756.753 kb on - strand, within SM_b21115 at 757.041 kb on + strand, within SM_b21115 at 757.041 kb on + strand, within SM_b21115 at 757.151 kb on + strand at 757.151 kb on + strand at 757.152 kb on - strand at 757.214 kb on - strand at 757.567 kb on + strand, within SM_b21116 at 757.567 kb on + strand, within SM_b21116 at 757.567 kb on + strand, within SM_b21116 at 757.749 kb on + strand, within SM_b21116 at 757.749 kb on + strand, within SM_b21116 at 757.749 kb on + strand, within SM_b21116 at 757.750 kb on - strand, within SM_b21116 at 757.750 kb on - strand, within SM_b21116 at 757.750 kb on - strand, within SM_b21116 at 757.750 kb on - strand, within SM_b21116 at 757.753 kb on + strand, within SM_b21116 at 757.754 kb on - strand, within SM_b21116 at 757.754 kb on - strand, within SM_b21116 at 757.754 kb on - strand, within SM_b21116 at 757.754 kb on - strand, within SM_b21116 at 757.812 kb on + strand, within SM_b21116
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.001 mg/ml remove 755,794 + SM_b21114 0.40 +5.3 756,045 + SM_b21114 0.59 +0.3 756,046 - SM_b21114 0.59 +0.5 756,050 - SM_b21114 0.59 +0.7 756,195 + SM_b21114 0.70 -0.3 756,196 - SM_b21114 0.70 -0.4 756,196 - SM_b21114 0.70 -0.7 756,569 + -1.0 756,569 + +1.4 756,569 + +0.5 756,569 + -0.3 756,753 - SM_b21115 0.28 +1.1 757,041 + SM_b21115 0.87 -0.6 757,041 + SM_b21115 0.87 -1.5 757,151 + +0.2 757,151 + +0.6 757,152 - -1.5 757,214 - +0.7 757,567 + SM_b21116 0.34 -0.9 757,567 + SM_b21116 0.34 -0.1 757,567 + SM_b21116 0.34 -0.8 757,749 + SM_b21116 0.59 +0.8 757,749 + SM_b21116 0.59 +1.0 757,749 + SM_b21116 0.59 -0.3 757,750 - SM_b21116 0.59 +0.8 757,750 - SM_b21116 0.59 +0.2 757,750 - SM_b21116 0.59 -0.2 757,750 - SM_b21116 0.59 -0.5 757,753 + SM_b21116 0.59 +0.3 757,754 - SM_b21116 0.59 -0.6 757,754 - SM_b21116 0.59 -0.2 757,754 - SM_b21116 0.59 +0.7 757,754 - SM_b21116 0.59 +0.9 757,812 + SM_b21116 0.67 +1.4
Or see this region's nucleotide sequence