Experiment: Cisplatin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21091 and SM_b21092 are separated by 4 nucleotides SM_b21092 and SM_b21093 are separated by 24 nucleotides SM_b21093 and SM_b21094 are separated by 194 nucleotides
SM_b21091: SM_b21091 - cell-wall lytic enzyme, muramidase (lysozyme) protein, at 733,897 to 734,907
_b21091
SM_b21092: SM_b21092 - acetyltransferase, at 734,912 to 735,388
_b21092
SM_b21093: SM_b21093 - LysR family transcriptional regulator, at 735,413 to 736,315
_b21093
SM_b21094: SM_b21094 - argininosuccinate lyase, at 736,510 to 737,976
_b21094
Position (kb) 735
736
737 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5 at 735.125 kb on + strand, within SM_b21092 at 735.170 kb on + strand, within SM_b21092 at 735.171 kb on - strand, within SM_b21092 at 735.305 kb on + strand, within SM_b21092 at 735.306 kb on - strand, within SM_b21092 at 735.323 kb on - strand, within SM_b21092 at 735.577 kb on + strand, within SM_b21093 at 735.639 kb on + strand, within SM_b21093 at 735.640 kb on - strand, within SM_b21093 at 735.640 kb on - strand, within SM_b21093 at 735.640 kb on - strand, within SM_b21093 at 735.702 kb on + strand, within SM_b21093 at 735.703 kb on - strand, within SM_b21093 at 735.703 kb on - strand, within SM_b21093 at 735.792 kb on + strand, within SM_b21093 at 735.792 kb on + strand, within SM_b21093 at 735.793 kb on - strand, within SM_b21093 at 735.834 kb on + strand, within SM_b21093 at 735.834 kb on + strand, within SM_b21093 at 735.834 kb on + strand at 735.834 kb on + strand, within SM_b21093 at 735.834 kb on + strand, within SM_b21093 at 735.834 kb on + strand, within SM_b21093 at 735.835 kb on - strand, within SM_b21093 at 735.878 kb on + strand, within SM_b21093 at 735.878 kb on + strand, within SM_b21093 at 735.879 kb on - strand, within SM_b21093 at 736.099 kb on + strand, within SM_b21093 at 736.101 kb on + strand, within SM_b21093 at 736.101 kb on + strand, within SM_b21093 at 736.102 kb on - strand, within SM_b21093 at 736.102 kb on - strand, within SM_b21093 at 736.389 kb on - strand at 736.389 kb on - strand at 736.393 kb on - strand at 736.609 kb on + strand at 736.773 kb on + strand, within SM_b21094 at 736.877 kb on - strand, within SM_b21094 at 736.956 kb on + strand, within SM_b21094 at 736.956 kb on + strand, within SM_b21094 at 736.980 kb on + strand, within SM_b21094 at 736.981 kb on - strand, within SM_b21094 at 737.240 kb on + strand, within SM_b21094 at 737.240 kb on + strand, within SM_b21094 at 737.240 kb on + strand, within SM_b21094 at 737.240 kb on + strand, within SM_b21094 at 737.240 kb on + strand, within SM_b21094 at 737.240 kb on + strand, within SM_b21094 at 737.241 kb on - strand, within SM_b21094 at 737.301 kb on + strand, within SM_b21094 at 737.301 kb on + strand, within SM_b21094 at 737.302 kb on - strand, within SM_b21094
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.001 mg/ml remove 735,125 + SM_b21092 0.45 -3.1 735,170 + SM_b21092 0.54 -0.2 735,171 - SM_b21092 0.54 +1.0 735,305 + SM_b21092 0.82 +0.5 735,306 - SM_b21092 0.83 -0.4 735,323 - SM_b21092 0.86 +0.6 735,577 + SM_b21093 0.18 -0.9 735,639 + SM_b21093 0.25 -0.3 735,640 - SM_b21093 0.25 +0.4 735,640 - SM_b21093 0.25 -0.8 735,640 - SM_b21093 0.25 -0.1 735,702 + SM_b21093 0.32 +0.2 735,703 - SM_b21093 0.32 -0.7 735,703 - SM_b21093 0.32 +0.2 735,792 + SM_b21093 0.42 -0.4 735,792 + SM_b21093 0.42 -0.2 735,793 - SM_b21093 0.42 +0.4 735,834 + SM_b21093 0.47 -0.9 735,834 + SM_b21093 0.47 +1.9 735,834 + +5.1 735,834 + SM_b21093 0.47 +1.8 735,834 + SM_b21093 0.47 -1.0 735,834 + SM_b21093 0.47 -2.1 735,835 - SM_b21093 0.47 -0.4 735,878 + SM_b21093 0.51 -0.7 735,878 + SM_b21093 0.51 +0.2 735,879 - SM_b21093 0.52 +0.2 736,099 + SM_b21093 0.76 -0.6 736,101 + SM_b21093 0.76 +0.6 736,101 + SM_b21093 0.76 +0.7 736,102 - SM_b21093 0.76 -1.2 736,102 - SM_b21093 0.76 -0.2 736,389 - -1.3 736,389 - +0.9 736,393 - +0.3 736,609 + +0.7 736,773 + SM_b21094 0.18 -0.4 736,877 - SM_b21094 0.25 -3.3 736,956 + SM_b21094 0.30 +0.8 736,956 + SM_b21094 0.30 -1.3 736,980 + SM_b21094 0.32 -0.9 736,981 - SM_b21094 0.32 +1.3 737,240 + SM_b21094 0.50 -0.5 737,240 + SM_b21094 0.50 -0.9 737,240 + SM_b21094 0.50 +1.7 737,240 + SM_b21094 0.50 +0.7 737,240 + SM_b21094 0.50 -0.4 737,240 + SM_b21094 0.50 -0.4 737,241 - SM_b21094 0.50 -0.3 737,301 + SM_b21094 0.54 +0.2 737,301 + SM_b21094 0.54 -0.8 737,302 - SM_b21094 0.54 -1.7
Or see this region's nucleotide sequence