Experiment: Cisplatin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21023 and SM_b21024 are separated by 168 nucleotides SM_b21024 and SM_b21025 are separated by 11 nucleotides SM_b21025 and SM_b21026 are separated by 143 nucleotides SM_b21026 and SM_b21027 are separated by 696 nucleotides
SM_b21023: SM_b21023 - hypothetical protein, at 646,729 to 647,043
_b21023
SM_b21024: SM_b21024 - hypothetical protein, at 647,212 to 647,379
_b21024
SM_b21025: SM_b21025 - hypothetical protein, at 647,391 to 647,810
_b21025
SM_b21026: SM_b21026 - exopeptide, at 647,954 to 648,091
_b21026
SM_b21027: SM_b21027 - hypothetical protein, at 648,788 to 649,504
_b21027
Position (kb) 647
648
649 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 646.998 kb on - strand, within SM_b21023 at 646.999 kb on + strand, within SM_b21023 at 646.999 kb on + strand, within SM_b21023 at 646.999 kb on + strand, within SM_b21023 at 647.000 kb on - strand, within SM_b21023 at 647.000 kb on - strand, within SM_b21023 at 647.001 kb on + strand, within SM_b21023 at 647.002 kb on - strand, within SM_b21023 at 647.042 kb on - strand at 647.055 kb on + strand at 647.194 kb on - strand at 647.194 kb on - strand at 647.288 kb on + strand, within SM_b21024 at 647.289 kb on - strand, within SM_b21024 at 647.289 kb on - strand, within SM_b21024 at 647.443 kb on - strand, within SM_b21025 at 647.578 kb on + strand, within SM_b21025 at 647.579 kb on - strand, within SM_b21025 at 647.580 kb on + strand, within SM_b21025 at 647.580 kb on + strand, within SM_b21025 at 647.580 kb on + strand, within SM_b21025 at 647.580 kb on + strand, within SM_b21025 at 647.581 kb on - strand, within SM_b21025 at 647.581 kb on - strand, within SM_b21025 at 647.581 kb on - strand, within SM_b21025 at 647.706 kb on - strand, within SM_b21025 at 647.752 kb on - strand, within SM_b21025 at 647.820 kb on - strand at 647.934 kb on + strand at 647.935 kb on - strand at 647.935 kb on - strand at 647.935 kb on - strand at 647.960 kb on + strand at 647.961 kb on - strand at 648.062 kb on + strand, within SM_b21026 at 648.062 kb on + strand, within SM_b21026 at 648.062 kb on + strand, within SM_b21026 at 648.063 kb on - strand, within SM_b21026 at 648.096 kb on + strand at 648.097 kb on - strand at 648.097 kb on - strand at 648.097 kb on - strand at 648.099 kb on + strand at 648.100 kb on - strand at 648.135 kb on + strand at 648.135 kb on + strand at 648.136 kb on - strand at 648.214 kb on + strand at 648.223 kb on + strand at 648.223 kb on + strand at 648.224 kb on - strand at 648.285 kb on - strand at 648.296 kb on + strand at 648.297 kb on - strand at 648.297 kb on - strand at 648.539 kb on + strand at 648.539 kb on + strand at 648.540 kb on - strand at 648.593 kb on - strand at 648.593 kb on - strand at 648.594 kb on + strand at 648.594 kb on + strand at 648.595 kb on - strand at 648.635 kb on - strand at 648.699 kb on + strand at 648.731 kb on + strand at 648.756 kb on + strand at 648.773 kb on + strand at 648.796 kb on + strand at 648.796 kb on + strand at 648.861 kb on + strand, within SM_b21027 at 648.861 kb on + strand, within SM_b21027 at 648.861 kb on + strand, within SM_b21027 at 648.861 kb on + strand, within SM_b21027 at 648.862 kb on - strand, within SM_b21027 at 648.862 kb on - strand, within SM_b21027 at 648.877 kb on - strand, within SM_b21027 at 648.879 kb on - strand, within SM_b21027 at 648.879 kb on - strand, within SM_b21027
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.001 mg/ml remove 646,998 - SM_b21023 0.85 +1.1 646,999 + SM_b21023 0.86 +1.5 646,999 + SM_b21023 0.86 +0.2 646,999 + SM_b21023 0.86 -0.8 647,000 - SM_b21023 0.86 -2.7 647,000 - SM_b21023 0.86 -0.3 647,001 + SM_b21023 0.86 -1.2 647,002 - SM_b21023 0.87 -0.5 647,042 - +0.3 647,055 + -0.9 647,194 - -0.4 647,194 - -1.5 647,288 + SM_b21024 0.45 +0.9 647,289 - SM_b21024 0.46 -0.2 647,289 - SM_b21024 0.46 +0.2 647,443 - SM_b21025 0.12 +0.3 647,578 + SM_b21025 0.45 +0.4 647,579 - SM_b21025 0.45 +0.9 647,580 + SM_b21025 0.45 +0.8 647,580 + SM_b21025 0.45 +0.2 647,580 + SM_b21025 0.45 +0.4 647,580 + SM_b21025 0.45 -4.5 647,581 - SM_b21025 0.45 -2.7 647,581 - SM_b21025 0.45 -1.5 647,581 - SM_b21025 0.45 +2.0 647,706 - SM_b21025 0.75 +0.6 647,752 - SM_b21025 0.86 +0.1 647,820 - -0.3 647,934 + -0.9 647,935 - -0.1 647,935 - +0.9 647,935 - +0.1 647,960 + +0.1 647,961 - -1.1 648,062 + SM_b21026 0.78 +1.1 648,062 + SM_b21026 0.78 -1.3 648,062 + SM_b21026 0.78 -0.2 648,063 - SM_b21026 0.79 -1.2 648,096 + -1.2 648,097 - +1.3 648,097 - -1.6 648,097 - -0.1 648,099 + +0.0 648,100 - -0.8 648,135 + +0.4 648,135 + +0.5 648,136 - -0.5 648,214 + +0.5 648,223 + +0.4 648,223 + -0.2 648,224 - +0.1 648,285 - -0.3 648,296 + -0.1 648,297 - +0.4 648,297 - -0.5 648,539 + +0.1 648,539 + +0.6 648,540 - +0.6 648,593 - -1.0 648,593 - -0.5 648,594 + +1.7 648,594 + -0.3 648,595 - +0.4 648,635 - -3.2 648,699 + -0.2 648,731 + +0.1 648,756 + +0.2 648,773 + +2.0 648,796 + +0.7 648,796 + -0.6 648,861 + SM_b21027 0.10 -0.3 648,861 + SM_b21027 0.10 -0.0 648,861 + SM_b21027 0.10 +0.5 648,861 + SM_b21027 0.10 +0.8 648,862 - SM_b21027 0.10 +0.8 648,862 - SM_b21027 0.10 -0.1 648,877 - SM_b21027 0.12 +0.4 648,879 - SM_b21027 0.13 +0.2 648,879 - SM_b21027 0.13 +0.1
Or see this region's nucleotide sequence