Experiment: Cisplatin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20520 and SM_b20521 are separated by 292 nucleotides
SM_b20520: SM_b20520 - hypothetical protein, at 546,127 to 546,684
_b20520
SM_b20521: SM_b20521 - hypothetical protein, at 546,977 to 548,086
_b20521
Position (kb) 546
547 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 545.466 kb on - strand at 545.536 kb on + strand at 545.700 kb on + strand at 545.748 kb on - strand at 545.748 kb on - strand at 545.786 kb on + strand at 545.786 kb on + strand at 545.868 kb on - strand at 546.025 kb on + strand at 546.209 kb on + strand, within SM_b20520 at 546.209 kb on + strand, within SM_b20520 at 546.210 kb on - strand, within SM_b20520 at 546.210 kb on - strand, within SM_b20520 at 546.225 kb on + strand, within SM_b20520 at 546.250 kb on + strand, within SM_b20520 at 546.250 kb on + strand, within SM_b20520 at 546.250 kb on + strand, within SM_b20520 at 546.250 kb on + strand, within SM_b20520 at 546.250 kb on + strand, within SM_b20520 at 546.250 kb on + strand, within SM_b20520 at 546.251 kb on - strand, within SM_b20520 at 546.251 kb on - strand, within SM_b20520 at 546.251 kb on - strand, within SM_b20520 at 546.251 kb on - strand, within SM_b20520 at 546.251 kb on - strand, within SM_b20520 at 546.341 kb on + strand, within SM_b20520 at 546.342 kb on - strand, within SM_b20520 at 546.456 kb on + strand, within SM_b20520 at 546.457 kb on - strand, within SM_b20520 at 546.603 kb on + strand, within SM_b20520 at 546.603 kb on + strand, within SM_b20520 at 546.604 kb on - strand, within SM_b20520 at 546.725 kb on + strand at 546.726 kb on - strand at 546.840 kb on + strand at 546.840 kb on + strand at 546.840 kb on + strand at 546.841 kb on - strand at 546.943 kb on - strand at 546.962 kb on + strand at 546.962 kb on + strand at 546.963 kb on - strand at 546.963 kb on - strand at 547.129 kb on + strand, within SM_b20521 at 547.129 kb on + strand, within SM_b20521 at 547.157 kb on + strand, within SM_b20521 at 547.157 kb on + strand, within SM_b20521 at 547.157 kb on + strand, within SM_b20521 at 547.157 kb on + strand, within SM_b20521 at 547.311 kb on + strand, within SM_b20521 at 547.311 kb on + strand, within SM_b20521 at 547.312 kb on - strand, within SM_b20521 at 547.440 kb on + strand, within SM_b20521 at 547.441 kb on - strand, within SM_b20521 at 547.441 kb on - strand, within SM_b20521 at 547.544 kb on + strand, within SM_b20521 at 547.545 kb on - strand, within SM_b20521 at 547.583 kb on + strand, within SM_b20521 at 547.583 kb on + strand, within SM_b20521
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.001 mg/ml remove 545,466 - -0.0 545,536 + -2.7 545,700 + -0.3 545,748 - +0.2 545,748 - +0.4 545,786 + +1.2 545,786 + -0.6 545,868 - +2.1 546,025 + -0.7 546,209 + SM_b20520 0.15 -2.4 546,209 + SM_b20520 0.15 -1.7 546,210 - SM_b20520 0.15 +2.1 546,210 - SM_b20520 0.15 -2.7 546,225 + SM_b20520 0.18 -0.7 546,250 + SM_b20520 0.22 -0.3 546,250 + SM_b20520 0.22 +0.3 546,250 + SM_b20520 0.22 +0.7 546,250 + SM_b20520 0.22 -3.2 546,250 + SM_b20520 0.22 -1.2 546,250 + SM_b20520 0.22 +0.6 546,251 - SM_b20520 0.22 -0.4 546,251 - SM_b20520 0.22 +0.6 546,251 - SM_b20520 0.22 -0.8 546,251 - SM_b20520 0.22 -0.2 546,251 - SM_b20520 0.22 -0.0 546,341 + SM_b20520 0.38 +1.1 546,342 - SM_b20520 0.39 -0.5 546,456 + SM_b20520 0.59 +0.2 546,457 - SM_b20520 0.59 -0.1 546,603 + SM_b20520 0.85 -0.2 546,603 + SM_b20520 0.85 +1.0 546,604 - SM_b20520 0.85 -3.7 546,725 + -1.3 546,726 - +0.9 546,840 + -0.9 546,840 + -1.1 546,840 + -0.2 546,841 - -0.3 546,943 - +0.8 546,962 + -0.1 546,962 + +0.2 546,963 - -0.6 546,963 - -1.2 547,129 + SM_b20521 0.14 -0.2 547,129 + SM_b20521 0.14 -0.1 547,157 + SM_b20521 0.16 -0.7 547,157 + SM_b20521 0.16 -0.3 547,157 + SM_b20521 0.16 +0.6 547,157 + SM_b20521 0.16 +0.2 547,311 + SM_b20521 0.30 +0.4 547,311 + SM_b20521 0.30 -1.2 547,312 - SM_b20521 0.30 +0.5 547,440 + SM_b20521 0.42 -0.4 547,441 - SM_b20521 0.42 +0.8 547,441 - SM_b20521 0.42 -0.5 547,544 + SM_b20521 0.51 +1.9 547,545 - SM_b20521 0.51 -0.1 547,583 + SM_b20521 0.55 -1.8 547,583 + SM_b20521 0.55 -0.8
Or see this region's nucleotide sequence