Experiment: Cisplatin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20395 and SM_b20396 are separated by 43 nucleotides SM_b20396 and SM_b20397 overlap by 4 nucleotides SM_b20397 and SM_b20398 are separated by 166 nucleotides
SM_b20395: SM_b20395 - dehydrogenase, at 409,180 to 411,429
_b20395
SM_b20396: SM_b20396 - dehydrogenase, at 411,473 to 412,456
_b20396
SM_b20397: SM_b20397 - oxidoreductase, at 412,453 to 413,019
_b20397
SM_b20398: SM_b20398 - hypothetical protein, at 413,186 to 413,680
_b20398
Position (kb) 411
412
413 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 410.835 kb on + strand, within SM_b20395 at 410.843 kb on + strand, within SM_b20395 at 411.006 kb on - strand, within SM_b20395 at 411.151 kb on + strand, within SM_b20395 at 411.151 kb on + strand, within SM_b20395 at 411.208 kb on + strand at 411.209 kb on - strand at 411.211 kb on + strand at 411.212 kb on - strand at 411.212 kb on - strand at 411.294 kb on - strand at 411.451 kb on - strand at 411.451 kb on - strand at 411.474 kb on + strand at 411.474 kb on + strand at 411.475 kb on - strand at 411.475 kb on - strand at 411.747 kb on + strand, within SM_b20396 at 411.747 kb on + strand, within SM_b20396 at 411.747 kb on + strand, within SM_b20396 at 411.748 kb on - strand, within SM_b20396 at 411.748 kb on - strand, within SM_b20396 at 411.775 kb on - strand, within SM_b20396 at 411.965 kb on - strand, within SM_b20396 at 411.965 kb on - strand, within SM_b20396 at 411.965 kb on - strand, within SM_b20396 at 412.243 kb on + strand, within SM_b20396 at 412.243 kb on + strand, within SM_b20396 at 412.244 kb on - strand, within SM_b20396 at 412.244 kb on - strand, within SM_b20396 at 412.244 kb on - strand, within SM_b20396 at 412.441 kb on - strand at 412.508 kb on + strand at 412.508 kb on + strand at 412.509 kb on - strand at 412.509 kb on - strand at 412.509 kb on - strand at 412.670 kb on + strand, within SM_b20397 at 412.696 kb on + strand, within SM_b20397 at 412.696 kb on + strand, within SM_b20397 at 412.697 kb on - strand, within SM_b20397 at 412.870 kb on - strand, within SM_b20397 at 413.132 kb on - strand at 413.192 kb on + strand at 413.192 kb on + strand at 413.193 kb on - strand at 413.193 kb on - strand at 413.374 kb on + strand, within SM_b20398
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.001 mg/ml remove 410,835 + SM_b20395 0.74 -0.3 410,843 + SM_b20395 0.74 +0.6 411,006 - SM_b20395 0.81 +1.2 411,151 + SM_b20395 0.88 -0.8 411,151 + SM_b20395 0.88 +0.6 411,208 + +0.1 411,209 - -1.6 411,211 + +0.3 411,212 - +1.4 411,212 - +1.0 411,294 - -1.4 411,451 - +0.1 411,451 - -0.3 411,474 + -0.1 411,474 + -1.0 411,475 - -0.6 411,475 - -1.8 411,747 + SM_b20396 0.28 -0.5 411,747 + SM_b20396 0.28 +2.1 411,747 + SM_b20396 0.28 -0.2 411,748 - SM_b20396 0.28 +0.5 411,748 - SM_b20396 0.28 -0.2 411,775 - SM_b20396 0.31 +0.1 411,965 - SM_b20396 0.50 +0.4 411,965 - SM_b20396 0.50 +1.9 411,965 - SM_b20396 0.50 -1.8 412,243 + SM_b20396 0.78 +2.8 412,243 + SM_b20396 0.78 -2.0 412,244 - SM_b20396 0.78 +0.7 412,244 - SM_b20396 0.78 +2.9 412,244 - SM_b20396 0.78 +4.1 412,441 - -0.9 412,508 + -0.1 412,508 + -0.3 412,509 - -0.1 412,509 - -0.2 412,509 - +0.2 412,670 + SM_b20397 0.38 +0.2 412,696 + SM_b20397 0.43 -3.0 412,696 + SM_b20397 0.43 +0.3 412,697 - SM_b20397 0.43 -0.8 412,870 - SM_b20397 0.74 +3.1 413,132 - +1.0 413,192 + +1.4 413,192 + -2.0 413,193 - -0.6 413,193 - -1.0 413,374 + SM_b20398 0.38 -2.7
Or see this region's nucleotide sequence