Experiment: Cisplatin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20370 and SM_b20371 are separated by 44 nucleotides SM_b20371 and SM_b20372 are separated by 23 nucleotides SM_b20372 and SM_b20373 are separated by 11 nucleotides SM_b20373 and SM_b20374 are separated by 79 nucleotides
SM_b20370: SM_b20370 - ATP-binding transport protein, at 382,623 to 383,303
_b20370
SM_b20371: SM_b20371 - ribose-5-phosphate isomerase B, at 383,348 to 383,794
_b20371
SM_b20372: SM_b20372 - hypothetical protein, at 383,818 to 385,095
_b20372
SM_b20373: SM_b20373 - TRAP dicarboxylate transporter, at 385,107 to 385,574
_b20373
SM_b20374: SM_b20374 - substrate-binding protein, at 385,654 to 386,646
_b20374
Position (kb) 383
384
385
386 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 382.878 kb on - strand, within SM_b20370 at 382.878 kb on - strand, within SM_b20370 at 383.171 kb on - strand, within SM_b20370 at 383.301 kb on + strand at 383.302 kb on - strand at 383.428 kb on - strand, within SM_b20371 at 383.691 kb on + strand, within SM_b20371 at 383.691 kb on + strand, within SM_b20371 at 383.691 kb on + strand, within SM_b20371 at 383.692 kb on - strand, within SM_b20371 at 383.706 kb on + strand, within SM_b20371 at 383.706 kb on + strand, within SM_b20371 at 383.706 kb on + strand, within SM_b20371 at 383.706 kb on + strand, within SM_b20371 at 383.707 kb on - strand, within SM_b20371 at 383.788 kb on + strand at 383.788 kb on + strand at 383.789 kb on - strand at 383.794 kb on + strand at 383.795 kb on - strand at 383.900 kb on + strand at 384.267 kb on + strand, within SM_b20372 at 384.268 kb on - strand, within SM_b20372 at 384.359 kb on + strand, within SM_b20372 at 384.359 kb on + strand, within SM_b20372 at 384.360 kb on - strand, within SM_b20372 at 384.360 kb on - strand, within SM_b20372 at 384.360 kb on - strand, within SM_b20372 at 384.360 kb on - strand, within SM_b20372 at 384.547 kb on + strand, within SM_b20372 at 384.548 kb on - strand, within SM_b20372 at 384.627 kb on - strand, within SM_b20372 at 384.627 kb on - strand, within SM_b20372 at 384.853 kb on - strand, within SM_b20372 at 384.956 kb on + strand, within SM_b20372 at 384.956 kb on + strand, within SM_b20372 at 384.957 kb on - strand, within SM_b20372 at 384.957 kb on - strand, within SM_b20372 at 385.003 kb on + strand at 385.003 kb on + strand at 385.003 kb on + strand at 385.004 kb on - strand at 385.004 kb on - strand at 385.034 kb on + strand at 385.259 kb on + strand, within SM_b20373 at 385.380 kb on - strand, within SM_b20373 at 385.593 kb on + strand at 385.594 kb on - strand at 385.655 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.001 mg/ml remove 382,878 - SM_b20370 0.37 -2.2 382,878 - SM_b20370 0.37 -0.8 383,171 - SM_b20370 0.80 -0.4 383,301 + +0.5 383,302 - -0.9 383,428 - SM_b20371 0.18 -2.4 383,691 + SM_b20371 0.77 -0.7 383,691 + SM_b20371 0.77 +0.6 383,691 + SM_b20371 0.77 -3.2 383,692 - SM_b20371 0.77 -0.8 383,706 + SM_b20371 0.80 -0.2 383,706 + SM_b20371 0.80 -2.8 383,706 + SM_b20371 0.80 -0.3 383,706 + SM_b20371 0.80 +0.9 383,707 - SM_b20371 0.80 -1.8 383,788 + +0.2 383,788 + -0.4 383,789 - -0.2 383,794 + -0.3 383,795 - -1.8 383,900 + +0.2 384,267 + SM_b20372 0.35 +0.5 384,268 - SM_b20372 0.35 +0.6 384,359 + SM_b20372 0.42 -0.4 384,359 + SM_b20372 0.42 -0.1 384,360 - SM_b20372 0.42 +0.3 384,360 - SM_b20372 0.42 +3.0 384,360 - SM_b20372 0.42 +3.2 384,360 - SM_b20372 0.42 -0.4 384,547 + SM_b20372 0.57 -0.1 384,548 - SM_b20372 0.57 +0.3 384,627 - SM_b20372 0.63 +1.8 384,627 - SM_b20372 0.63 +0.0 384,853 - SM_b20372 0.81 +0.0 384,956 + SM_b20372 0.89 -0.9 384,956 + SM_b20372 0.89 -0.4 384,957 - SM_b20372 0.89 -0.4 384,957 - SM_b20372 0.89 +4.2 385,003 + -0.2 385,003 + -0.8 385,003 + +3.2 385,004 - +1.1 385,004 - -1.0 385,034 + -0.6 385,259 + SM_b20373 0.32 +0.2 385,380 - SM_b20373 0.58 +0.2 385,593 + +0.2 385,594 - +0.2 385,655 + +0.7
Or see this region's nucleotide sequence