Experiment: Cisplatin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20363 and SM_b20364 overlap by 4 nucleotides SM_b20364 and SM_b20365 are separated by 174 nucleotides
SM_b20363: SM_b20363 - iron ABC transporter ATP-binding protein, at 373,363 to 374,424
_b20363
SM_b20364: SM_b20364 - iron ABC transporter permease, at 374,421 to 376,649
_b20364
SM_b20365: SM_b20365 - iron ABC transporter substrate-binding protein, at 376,824 to 377,852
_b20365
Position (kb) 374
375
376
377 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 373.488 kb on - strand, within SM_b20363 at 373.509 kb on - strand, within SM_b20363 at 373.509 kb on - strand, within SM_b20363 at 373.844 kb on + strand, within SM_b20363 at 374.098 kb on - strand, within SM_b20363 at 374.117 kb on + strand, within SM_b20363 at 374.160 kb on - strand, within SM_b20363 at 374.205 kb on + strand, within SM_b20363 at 374.206 kb on - strand, within SM_b20363 at 374.206 kb on - strand, within SM_b20363 at 374.206 kb on - strand, within SM_b20363 at 374.383 kb on + strand at 374.383 kb on + strand at 374.384 kb on - strand at 374.384 kb on - strand at 374.384 kb on - strand at 374.384 kb on - strand at 374.384 kb on - strand at 374.609 kb on + strand at 374.612 kb on - strand at 374.612 kb on - strand at 374.612 kb on - strand at 374.923 kb on + strand, within SM_b20364 at 374.923 kb on + strand, within SM_b20364 at 375.020 kb on - strand, within SM_b20364 at 375.157 kb on + strand, within SM_b20364 at 375.157 kb on + strand, within SM_b20364 at 375.158 kb on - strand, within SM_b20364 at 375.158 kb on - strand at 375.158 kb on - strand, within SM_b20364 at 375.696 kb on - strand, within SM_b20364 at 375.887 kb on - strand, within SM_b20364 at 375.887 kb on - strand, within SM_b20364 at 376.043 kb on + strand, within SM_b20364 at 376.576 kb on + strand at 376.653 kb on + strand at 376.653 kb on + strand at 376.653 kb on + strand at 376.654 kb on - strand at 376.695 kb on + strand at 376.695 kb on + strand at 376.696 kb on - strand at 376.696 kb on - strand at 376.894 kb on + strand at 376.894 kb on + strand at 376.895 kb on - strand at 376.910 kb on - strand at 376.910 kb on - strand at 377.039 kb on - strand, within SM_b20365 at 377.275 kb on + strand, within SM_b20365 at 377.329 kb on + strand, within SM_b20365 at 377.330 kb on - strand, within SM_b20365 at 377.449 kb on + strand, within SM_b20365 at 377.473 kb on + strand, within SM_b20365 at 377.554 kb on + strand, within SM_b20365 at 377.554 kb on + strand, within SM_b20365
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.001 mg/ml remove 373,488 - SM_b20363 0.12 +0.5 373,509 - SM_b20363 0.14 +0.2 373,509 - SM_b20363 0.14 +1.2 373,844 + SM_b20363 0.45 +0.4 374,098 - SM_b20363 0.69 +2.4 374,117 + SM_b20363 0.71 -3.5 374,160 - SM_b20363 0.75 -0.0 374,205 + SM_b20363 0.79 +0.6 374,206 - SM_b20363 0.79 +0.1 374,206 - SM_b20363 0.79 -0.9 374,206 - SM_b20363 0.79 -1.5 374,383 + -0.8 374,383 + +0.6 374,384 - -0.8 374,384 - -0.7 374,384 - -0.0 374,384 - -1.1 374,384 - -0.7 374,609 + -0.4 374,612 - +0.9 374,612 - -2.1 374,612 - -2.0 374,923 + SM_b20364 0.23 -0.4 374,923 + SM_b20364 0.23 -0.6 375,020 - SM_b20364 0.27 -2.4 375,157 + SM_b20364 0.33 -0.7 375,157 + SM_b20364 0.33 -0.4 375,158 - SM_b20364 0.33 -0.0 375,158 - +1.8 375,158 - SM_b20364 0.33 -1.1 375,696 - SM_b20364 0.57 -2.4 375,887 - SM_b20364 0.66 +0.6 375,887 - SM_b20364 0.66 -0.2 376,043 + SM_b20364 0.73 -1.6 376,576 + -0.6 376,653 + +0.6 376,653 + +0.1 376,653 + +1.2 376,654 - -2.1 376,695 + -0.8 376,695 + -0.1 376,696 - +0.4 376,696 - +0.6 376,894 + +1.6 376,894 + -2.2 376,895 - -0.4 376,910 - +1.1 376,910 - +1.2 377,039 - SM_b20365 0.21 -1.9 377,275 + SM_b20365 0.44 -2.6 377,329 + SM_b20365 0.49 +0.3 377,330 - SM_b20365 0.49 +0.2 377,449 + SM_b20365 0.61 -3.3 377,473 + SM_b20365 0.63 -1.6 377,554 + SM_b20365 0.71 -0.9 377,554 + SM_b20365 0.71 +0.2
Or see this region's nucleotide sequence