Experiment: Cisplatin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20328 and SM_b20329 are separated by 165 nucleotides SM_b20329 and SM_b20330 overlap by 4 nucleotides
SM_b20328: SM_b20328 - ABC transporter for D-trehalose/D-maltose/sucrose, ATPase component (ThuK) <small>(from data)</small>, at 331,283 to 332,311
_b20328
SM_b20329: SM_b20329 - required for glucoside 3-dehydrogenase activity on raffinose or trehalose (thuA) (EC 1.1.99.13) <small>(from data)</small>, at 332,477 to 333,289
_b20329
SM_b20330: SM_b20330 - glucoside 3-dehydrogenase; active on raffinose or trehalose (thuB) (EC 1.1.99.13) <small>(from data)</small>, at 333,286 to 334,383
_b20330
Position (kb) 332
333
334 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 331.549 kb on + strand, within SM_b20328 at 331.559 kb on + strand, within SM_b20328 at 331.662 kb on + strand, within SM_b20328 at 331.850 kb on + strand, within SM_b20328 at 331.850 kb on + strand, within SM_b20328 at 331.851 kb on - strand, within SM_b20328 at 331.897 kb on - strand, within SM_b20328 at 332.033 kb on + strand, within SM_b20328 at 332.033 kb on + strand, within SM_b20328 at 332.033 kb on + strand, within SM_b20328 at 332.033 kb on + strand, within SM_b20328 at 332.033 kb on + strand, within SM_b20328 at 332.033 kb on + strand, within SM_b20328 at 332.034 kb on - strand, within SM_b20328 at 332.034 kb on - strand, within SM_b20328 at 332.034 kb on - strand, within SM_b20328 at 332.141 kb on + strand, within SM_b20328 at 332.141 kb on + strand, within SM_b20328 at 332.142 kb on - strand, within SM_b20328 at 332.142 kb on - strand, within SM_b20328 at 332.142 kb on - strand, within SM_b20328 at 332.142 kb on - strand, within SM_b20328 at 332.143 kb on + strand, within SM_b20328 at 332.144 kb on - strand, within SM_b20328 at 332.144 kb on - strand, within SM_b20328 at 332.144 kb on - strand, within SM_b20328 at 332.144 kb on - strand, within SM_b20328 at 332.144 kb on - strand, within SM_b20328 at 332.147 kb on + strand, within SM_b20328 at 332.148 kb on - strand, within SM_b20328 at 332.395 kb on + strand at 332.396 kb on - strand at 332.751 kb on + strand, within SM_b20329 at 332.751 kb on + strand, within SM_b20329 at 332.752 kb on - strand, within SM_b20329 at 332.790 kb on + strand, within SM_b20329 at 332.790 kb on + strand, within SM_b20329 at 332.963 kb on + strand, within SM_b20329 at 332.963 kb on + strand, within SM_b20329 at 332.963 kb on + strand, within SM_b20329 at 332.963 kb on + strand, within SM_b20329 at 332.964 kb on - strand, within SM_b20329 at 332.964 kb on - strand, within SM_b20329 at 332.964 kb on - strand, within SM_b20329 at 333.073 kb on + strand, within SM_b20329 at 333.073 kb on + strand, within SM_b20329 at 333.081 kb on - strand, within SM_b20329 at 333.130 kb on - strand, within SM_b20329 at 333.130 kb on - strand, within SM_b20329 at 333.164 kb on + strand, within SM_b20329 at 333.165 kb on - strand, within SM_b20329 at 333.166 kb on + strand, within SM_b20329 at 333.166 kb on + strand at 333.182 kb on + strand, within SM_b20329 at 333.182 kb on + strand, within SM_b20329 at 333.183 kb on - strand, within SM_b20329 at 333.185 kb on - strand, within SM_b20329 at 333.185 kb on - strand, within SM_b20329 at 333.185 kb on - strand, within SM_b20329 at 333.748 kb on + strand, within SM_b20330 at 333.748 kb on + strand, within SM_b20330 at 333.749 kb on - strand, within SM_b20330 at 333.749 kb on - strand, within SM_b20330 at 333.967 kb on + strand at 333.968 kb on - strand, within SM_b20330 at 334.119 kb on + strand, within SM_b20330 at 334.119 kb on + strand, within SM_b20330 at 334.213 kb on + strand, within SM_b20330 at 334.214 kb on - strand, within SM_b20330 at 334.214 kb on - strand, within SM_b20330
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.001 mg/ml remove 331,549 + SM_b20328 0.26 -1.9 331,559 + SM_b20328 0.27 -0.4 331,662 + SM_b20328 0.37 -0.5 331,850 + SM_b20328 0.55 +0.6 331,850 + SM_b20328 0.55 -0.5 331,851 - SM_b20328 0.55 +2.3 331,897 - SM_b20328 0.60 +0.7 332,033 + SM_b20328 0.73 +1.0 332,033 + SM_b20328 0.73 -3.1 332,033 + SM_b20328 0.73 -0.9 332,033 + SM_b20328 0.73 -0.4 332,033 + SM_b20328 0.73 -1.3 332,033 + SM_b20328 0.73 -2.3 332,034 - SM_b20328 0.73 -0.0 332,034 - SM_b20328 0.73 -0.3 332,034 - SM_b20328 0.73 -0.0 332,141 + SM_b20328 0.83 +0.3 332,141 + SM_b20328 0.83 -0.3 332,142 - SM_b20328 0.83 +1.3 332,142 - SM_b20328 0.83 -1.8 332,142 - SM_b20328 0.83 +2.5 332,142 - SM_b20328 0.83 -0.4 332,143 + SM_b20328 0.84 +2.2 332,144 - SM_b20328 0.84 +0.1 332,144 - SM_b20328 0.84 -0.3 332,144 - SM_b20328 0.84 -2.0 332,144 - SM_b20328 0.84 -1.3 332,144 - SM_b20328 0.84 -0.2 332,147 + SM_b20328 0.84 -2.1 332,148 - SM_b20328 0.84 -0.3 332,395 + -0.3 332,396 - +0.2 332,751 + SM_b20329 0.34 -2.7 332,751 + SM_b20329 0.34 -1.2 332,752 - SM_b20329 0.34 -1.2 332,790 + SM_b20329 0.38 +0.3 332,790 + SM_b20329 0.38 -0.4 332,963 + SM_b20329 0.60 +0.3 332,963 + SM_b20329 0.60 -1.9 332,963 + SM_b20329 0.60 +0.3 332,963 + SM_b20329 0.60 +1.3 332,964 - SM_b20329 0.60 +1.6 332,964 - SM_b20329 0.60 -0.9 332,964 - SM_b20329 0.60 +2.0 333,073 + SM_b20329 0.73 +0.4 333,073 + SM_b20329 0.73 -0.5 333,081 - SM_b20329 0.74 +0.0 333,130 - SM_b20329 0.80 +2.3 333,130 - SM_b20329 0.80 +0.8 333,164 + SM_b20329 0.85 -1.1 333,165 - SM_b20329 0.85 +0.7 333,166 + SM_b20329 0.85 +1.3 333,166 + +1.3 333,182 + SM_b20329 0.87 -1.0 333,182 + SM_b20329 0.87 +0.1 333,183 - SM_b20329 0.87 -0.3 333,185 - SM_b20329 0.87 -1.4 333,185 - SM_b20329 0.87 +1.3 333,185 - SM_b20329 0.87 -1.1 333,748 + SM_b20330 0.42 +1.0 333,748 + SM_b20330 0.42 -2.2 333,749 - SM_b20330 0.42 +2.4 333,749 - SM_b20330 0.42 -0.0 333,967 + -0.3 333,968 - SM_b20330 0.62 -1.5 334,119 + SM_b20330 0.76 -0.9 334,119 + SM_b20330 0.76 +0.2 334,213 + SM_b20330 0.84 +0.3 334,214 - SM_b20330 0.85 +1.5 334,214 - SM_b20330 0.85 -0.2
Or see this region's nucleotide sequence