Experiment: Cisplatin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20272 and SM_b20273 are separated by 72 nucleotides SM_b20273 and SM_b20274 are separated by 255 nucleotides SM_b20274 and SM_b20275 are separated by 177 nucleotides SM_b20275 and SM_b20276 are separated by 91 nucleotides SM_b20276 and SM_b20277 overlap by 4 nucleotides
SM_b20272: SM_b20272 - transporter protein, at 277,378 to 278,586
_b20272
SM_b20273: SM_b20273 - hypothetical protein, at 278,659 to 278,844
_b20273
SM_b20274: SM_b20274 - hypothetical protein, at 279,100 to 279,285
_b20274
SM_b20275: SM_b20275 - hypothetical protein, at 279,463 to 280,323
_b20275
SM_b20276: SM_b20276 - transcriptional regulator, at 280,415 to 281,305
_b20276
SM_b20277: SM_b20277 - hypothetical protein, at 281,302 to 282,645
_b20277
Position (kb) 279
280
281 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 278.479 kb on + strand at 278.480 kb on - strand at 278.480 kb on - strand at 278.480 kb on - strand at 278.491 kb on + strand at 278.492 kb on - strand at 278.667 kb on + strand at 278.725 kb on + strand, within SM_b20273 at 278.727 kb on + strand, within SM_b20273 at 278.728 kb on - strand, within SM_b20273 at 278.728 kb on - strand, within SM_b20273 at 279.045 kb on - strand at 279.102 kb on - strand at 279.138 kb on - strand, within SM_b20274 at 279.189 kb on - strand, within SM_b20274 at 279.206 kb on - strand, within SM_b20274 at 279.217 kb on + strand, within SM_b20274 at 279.217 kb on + strand, within SM_b20274 at 279.227 kb on - strand, within SM_b20274 at 279.334 kb on - strand at 279.783 kb on + strand, within SM_b20275 at 279.797 kb on - strand, within SM_b20275 at 279.800 kb on + strand, within SM_b20275 at 279.800 kb on + strand, within SM_b20275 at 279.800 kb on + strand, within SM_b20275 at 279.801 kb on - strand, within SM_b20275 at 279.801 kb on - strand, within SM_b20275 at 280.037 kb on + strand, within SM_b20275 at 280.038 kb on - strand, within SM_b20275 at 280.406 kb on - strand at 280.494 kb on - strand at 280.495 kb on + strand at 280.610 kb on + strand, within SM_b20276 at 280.611 kb on - strand, within SM_b20276 at 280.611 kb on - strand, within SM_b20276 at 280.631 kb on + strand, within SM_b20276 at 280.884 kb on - strand, within SM_b20276 at 280.885 kb on + strand, within SM_b20276 at 280.885 kb on + strand, within SM_b20276 at 280.886 kb on - strand, within SM_b20276 at 281.005 kb on + strand, within SM_b20276 at 281.033 kb on + strand at 281.033 kb on + strand, within SM_b20276 at 281.034 kb on - strand, within SM_b20276 at 281.034 kb on - strand, within SM_b20276
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.001 mg/ml remove 278,479 + -0.4 278,480 - -2.5 278,480 - -1.5 278,480 - +0.3 278,491 + -0.5 278,492 - +0.1 278,667 + +2.3 278,725 + SM_b20273 0.35 +0.1 278,727 + SM_b20273 0.37 -1.7 278,728 - SM_b20273 0.37 -3.0 278,728 - SM_b20273 0.37 +1.4 279,045 - -2.0 279,102 - +0.1 279,138 - SM_b20274 0.20 +0.1 279,189 - SM_b20274 0.48 -0.4 279,206 - SM_b20274 0.57 +0.9 279,217 + SM_b20274 0.63 +0.7 279,217 + SM_b20274 0.63 +0.7 279,227 - SM_b20274 0.68 +0.7 279,334 - +0.9 279,783 + SM_b20275 0.37 -1.2 279,797 - SM_b20275 0.39 -0.5 279,800 + SM_b20275 0.39 -2.4 279,800 + SM_b20275 0.39 -3.8 279,800 + SM_b20275 0.39 -0.1 279,801 - SM_b20275 0.39 +0.1 279,801 - SM_b20275 0.39 -1.7 280,037 + SM_b20275 0.67 +1.4 280,038 - SM_b20275 0.67 -1.2 280,406 - +0.5 280,494 - +0.4 280,495 + +0.1 280,610 + SM_b20276 0.22 -1.2 280,611 - SM_b20276 0.22 +0.3 280,611 - SM_b20276 0.22 -1.1 280,631 + SM_b20276 0.24 -0.3 280,884 - SM_b20276 0.53 +0.1 280,885 + SM_b20276 0.53 -0.1 280,885 + SM_b20276 0.53 +0.3 280,886 - SM_b20276 0.53 +0.5 281,005 + SM_b20276 0.66 -0.1 281,033 + -1.1 281,033 + SM_b20276 0.69 +0.4 281,034 - SM_b20276 0.69 +0.3 281,034 - SM_b20276 0.69 -0.0
Or see this region's nucleotide sequence