Experiment: Cisplatin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20268 and SM_b20269 overlap by 4 nucleotides SM_b20269 and SM_b20270 are separated by 50 nucleotides
SM_b20268: SM_b20268 - hydroxyproline-2-epimerase, at 272,694 to 273,695
_b20268
SM_b20269: SM_b20269 - hypothetical protein, at 273,692 to 275,383
_b20269
SM_b20270: SM_b20270 - proline racemase, at 275,434 to 276,462
_b20270
Position (kb) 273
274
275
276 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 272.936 kb on - strand, within SM_b20268 at 273.075 kb on + strand, within SM_b20268 at 273.075 kb on + strand, within SM_b20268 at 273.076 kb on - strand, within SM_b20268 at 273.076 kb on - strand, within SM_b20268 at 273.196 kb on - strand, within SM_b20268 at 273.257 kb on + strand, within SM_b20268 at 273.750 kb on + strand at 274.293 kb on - strand, within SM_b20269 at 274.293 kb on - strand, within SM_b20269 at 274.293 kb on - strand, within SM_b20269 at 274.293 kb on - strand, within SM_b20269 at 274.293 kb on - strand, within SM_b20269 at 274.457 kb on + strand, within SM_b20269 at 274.457 kb on + strand, within SM_b20269 at 274.696 kb on - strand, within SM_b20269 at 274.696 kb on - strand, within SM_b20269 at 275.007 kb on + strand, within SM_b20269 at 275.233 kb on + strand at 275.264 kb on + strand at 275.264 kb on + strand at 275.264 kb on + strand at 275.265 kb on - strand at 275.265 kb on - strand at 275.265 kb on - strand at 275.302 kb on - strand at 275.302 kb on - strand at 275.689 kb on - strand, within SM_b20270 at 275.847 kb on + strand, within SM_b20270 at 275.848 kb on - strand, within SM_b20270 at 275.848 kb on - strand, within SM_b20270 at 276.378 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.001 mg/ml remove 272,936 - SM_b20268 0.24 -2.6 273,075 + SM_b20268 0.38 -0.9 273,075 + SM_b20268 0.38 -2.6 273,076 - SM_b20268 0.38 -0.2 273,076 - SM_b20268 0.38 +0.4 273,196 - SM_b20268 0.50 +0.4 273,257 + SM_b20268 0.56 +0.0 273,750 + -1.4 274,293 - SM_b20269 0.36 -2.6 274,293 - SM_b20269 0.36 +0.7 274,293 - SM_b20269 0.36 +0.3 274,293 - SM_b20269 0.36 +0.6 274,293 - SM_b20269 0.36 -2.2 274,457 + SM_b20269 0.45 -1.3 274,457 + SM_b20269 0.45 +0.7 274,696 - SM_b20269 0.59 +0.9 274,696 - SM_b20269 0.59 +3.1 275,007 + SM_b20269 0.78 +0.1 275,233 + +0.3 275,264 + +0.4 275,264 + +0.1 275,264 + +1.8 275,265 - -0.8 275,265 - -1.6 275,265 - -1.3 275,302 - +0.6 275,302 - +0.5 275,689 - SM_b20270 0.25 -0.1 275,847 + SM_b20270 0.40 +0.0 275,848 - SM_b20270 0.40 +1.5 275,848 - SM_b20270 0.40 -2.9 276,378 + +0.1
Or see this region's nucleotide sequence