Experiment: Cisplatin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20246 and SM_b20247 are separated by 4 nucleotides SM_b20247 and SM_b20248 are separated by 29 nucleotides
SM_b20246: SM_b20246 - oxidoreductase, at 251,298 to 252,290
_b20246
SM_b20247: SM_b20247 - oxidoreductase, at 252,295 to 253,308
_b20247
SM_b20248: SM_b20248 - hypothetical protein, at 253,338 to 255,086
_b20248
Position (kb) 252
253
254 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 251.312 kb on - strand at 251.312 kb on - strand at 251.371 kb on + strand at 251.452 kb on + strand, within SM_b20246 at 251.592 kb on + strand, within SM_b20246 at 251.593 kb on - strand, within SM_b20246 at 251.601 kb on + strand, within SM_b20246 at 251.602 kb on - strand, within SM_b20246 at 251.813 kb on - strand, within SM_b20246 at 252.236 kb on + strand at 252.697 kb on + strand, within SM_b20247 at 252.698 kb on - strand, within SM_b20247 at 252.787 kb on + strand, within SM_b20247 at 252.879 kb on - strand, within SM_b20247 at 252.879 kb on - strand, within SM_b20247 at 252.879 kb on - strand, within SM_b20247 at 252.973 kb on + strand, within SM_b20247 at 253.075 kb on + strand, within SM_b20247 at 253.075 kb on + strand, within SM_b20247 at 253.076 kb on - strand, within SM_b20247 at 253.101 kb on + strand, within SM_b20247 at 253.121 kb on - strand, within SM_b20247 at 253.297 kb on + strand at 253.307 kb on - strand at 253.340 kb on - strand at 253.340 kb on - strand at 253.375 kb on + strand at 253.465 kb on + strand at 253.891 kb on + strand, within SM_b20248 at 254.179 kb on - strand, within SM_b20248
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.001 mg/ml remove 251,312 - +0.1 251,312 - -1.5 251,371 + -0.7 251,452 + SM_b20246 0.16 +0.6 251,592 + SM_b20246 0.30 -0.2 251,593 - SM_b20246 0.30 -0.2 251,601 + SM_b20246 0.31 -2.1 251,602 - SM_b20246 0.31 -0.4 251,813 - SM_b20246 0.52 -0.4 252,236 + -0.0 252,697 + SM_b20247 0.40 -0.8 252,698 - SM_b20247 0.40 -0.6 252,787 + SM_b20247 0.49 -2.7 252,879 - SM_b20247 0.58 +0.3 252,879 - SM_b20247 0.58 +0.1 252,879 - SM_b20247 0.58 +0.7 252,973 + SM_b20247 0.67 -1.8 253,075 + SM_b20247 0.77 +0.0 253,075 + SM_b20247 0.77 +1.3 253,076 - SM_b20247 0.77 +0.8 253,101 + SM_b20247 0.79 -1.1 253,121 - SM_b20247 0.81 +0.3 253,297 + +0.1 253,307 - +0.5 253,340 - +3.4 253,340 - +0.5 253,375 + -3.2 253,465 + +0.5 253,891 + SM_b20248 0.32 -1.0 254,179 - SM_b20248 0.48 +0.0
Or see this region's nucleotide sequence