Strain Fitness in Sinorhizobium meliloti 1021 around SM_b20129
Experiment: Cisplatin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
141,030 | + | SM_b20128 | 0.75 | -2.4 | |
141,031 | - | SM_b20128 | 0.75 | +0.7 | |
141,331 | + | +1.2 | |||
141,331 | + | -0.9 | |||
141,401 | + | -2.8 | |||
141,401 | + | -1.6 | |||
141,402 | - | -1.5 | |||
141,402 | - | +0.7 | |||
141,402 | - | -0.0 | |||
141,438 | + | +0.3 | |||
141,838 | + | +1.7 | |||
141,995 | + | SM_b20129 | 0.24 | +1.3 | |
141,995 | + | SM_b20129 | 0.24 | -0.3 | |
142,097 | + | SM_b20129 | 0.37 | -0.9 | |
142,097 | + | SM_b20129 | 0.37 | +1.6 | |
142,098 | - | SM_b20129 | 0.38 | -0.7 | |
142,210 | + | SM_b20129 | 0.52 | +0.3 | |
142,211 | - | SM_b20129 | 0.52 | -1.7 | |
142,447 | - | SM_b20129 | 0.82 | -3.2 | |
142,651 | - | -2.7 | |||
142,651 | - | +2.0 | |||
142,653 | + | -1.5 | |||
142,653 | + | -1.3 | |||
142,653 | + | -1.3 | |||
142,818 | - | SM_b20130 | 0.21 | -1.8 | |
142,821 | + | SM_b20130 | 0.22 | +0.4 | |
142,821 | + | SM_b20130 | 0.22 | +0.1 | |
142,821 | + | SM_b20130 | 0.22 | -0.3 | |
142,942 | + | SM_b20130 | 0.36 | -3.3 | |
142,943 | - | SM_b20130 | 0.36 | +0.1 | |
143,046 | + | SM_b20130 | 0.48 | +1.6 | |
143,140 | + | SM_b20130 | 0.58 | +1.5 | |
143,578 | - | SM_b20131 | 0.17 | +0.2 |
Or see this region's nucleotide sequence