Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS29725

Experiment: Trisodium citrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C)
6,604,992	+				-1.1
6,604,993	-				+0.7
6,604,993	-				+1.3
6,604,993	-				-1.4
6,605,004	+				-0.6
6,605,004	+				+3.1
6,605,004	+				+0.6
6,605,005	-				+0.8
6,605,005	-				-1.3
6,605,005	-				-0.5
6,605,005	-				+0.9
6,605,005	-				+0.6
6,605,014	+				-1.6
6,605,014	+				+0.3
6,605,015	-				-0.3
6,605,187	+		PFLU_RS29720	0.16	-0.6
6,605,188	-		PFLU_RS29720	0.17	+0.2
6,605,188	-		PFLU_RS29720	0.17	-1.1
6,605,198	+		PFLU_RS29720	0.19	-0.8
6,605,198	+		PFLU_RS29720	0.19	+1.4
6,605,198	+		PFLU_RS29720	0.19	-0.0
6,605,198	+		PFLU_RS29720	0.19	-0.9
6,605,198	+		PFLU_RS29720	0.19	-0.8
6,605,198	+		PFLU_RS29720	0.19	-0.6
6,605,198	+		PFLU_RS29720	0.19	+0.3
6,605,198	+		PFLU_RS29720	0.19	-1.1
6,605,198	+		PFLU_RS29720	0.19	+0.3
6,605,198	+		PFLU_RS29720	0.19	-1.6
6,605,198	+		PFLU_RS29720	0.19	+0.0
6,605,198	+		PFLU_RS29720	0.19	-1.6
6,605,198	+		PFLU_RS29720	0.19	+1.0
6,605,198	+		PFLU_RS29720	0.19	+0.4
6,605,198	+		PFLU_RS29720	0.19	+0.7
6,605,198	+		PFLU_RS29720	0.19	+0.8
6,605,199	-		PFLU_RS29720	0.20	-2.0
6,605,199	-		PFLU_RS29720	0.20	-0.2
6,605,199	-		PFLU_RS29720	0.20	-1.5
6,605,199	-		PFLU_RS29720	0.20	+0.1
6,605,199	-		PFLU_RS29720	0.20	+0.5
6,605,199	-		PFLU_RS29720	0.20	-0.1
6,605,199	-		PFLU_RS29720	0.20	-0.7
6,605,199	-		PFLU_RS29720	0.20	-0.1
6,605,204	+		PFLU_RS29720	0.21	+1.3
6,605,204	+		PFLU_RS29720	0.21	-1.7
6,605,204	+		PFLU_RS29720	0.21	-1.6
6,605,204	+		PFLU_RS29720	0.21	+0.4
6,605,204	+		PFLU_RS29720	0.21	+0.6
6,605,204	+		PFLU_RS29720	0.21	+0.9
6,605,205	-		PFLU_RS29720	0.21	-0.0
6,605,205	-		PFLU_RS29720	0.21	-1.6
6,605,205	-		PFLU_RS29720	0.21	+0.4
6,605,205	-		PFLU_RS29720	0.21	+0.3
6,605,205	-		PFLU_RS29720	0.21	+2.1
6,605,205	-		PFLU_RS29720	0.21	+1.4
6,605,205	-		PFLU_RS29720	0.21	+0.4
6,605,223	-		PFLU_RS29720	0.26	-1.1
6,605,223	-		PFLU_RS29720	0.26	-0.7
6,605,223	-		PFLU_RS29720	0.26	+0.5
6,605,358	+		PFLU_RS29720	0.62	-1.9
6,605,366	+		PFLU_RS29720	0.64	+0.2
6,605,367	+		PFLU_RS29720	0.64	+0.0
6,605,367	+		PFLU_RS29720	0.64	+0.1
6,605,367	+		PFLU_RS29720	0.64	-0.9
6,605,367	+		PFLU_RS29720	0.64	-0.1
6,605,367	+		PFLU_RS29720	0.64	-0.4
6,605,367	+		PFLU_RS29720	0.64	-1.1
6,605,367	+		PFLU_RS29720	0.64	+0.7
6,605,367	+		PFLU_RS29720	0.64	+0.1
6,605,367	+		PFLU_RS29720	0.64	-0.1
6,605,367	+		PFLU_RS29720	0.64	+0.7
6,605,367	+		PFLU_RS29720	0.64	+1.0
6,605,367	+		PFLU_RS29720	0.64	-2.2
6,605,367	+		PFLU_RS29720	0.64	+1.4
6,605,367	+		PFLU_RS29720	0.64	+0.2
6,605,367	+		PFLU_RS29720	0.64	+0.1
6,605,367	+		PFLU_RS29720	0.64	+0.9
6,605,367	+		PFLU_RS29720	0.64	-2.9
6,605,367	+		PFLU_RS29720	0.64	+0.2
6,605,367	+		PFLU_RS29720	0.64	+0.6
6,605,368	-		PFLU_RS29720	0.64	+0.1
6,605,368	-		PFLU_RS29720	0.64	+0.1
6,605,368	-		PFLU_RS29720	0.64	+0.0
6,605,368	-		PFLU_RS29720	0.64	-0.1
6,605,368	-		PFLU_RS29720	0.64	-0.1
6,605,368	-		PFLU_RS29720	0.64	+0.9
6,605,368	-		PFLU_RS29720	0.64	+1.5
6,605,368	-		PFLU_RS29720	0.64	-1.0
6,605,368	-		PFLU_RS29720	0.64	-0.7
6,605,368	-		PFLU_RS29720	0.64	+0.3
6,605,368	-		PFLU_RS29720	0.64	+0.4
6,605,369	+		PFLU_RS29720	0.65	-1.4
6,605,369	+		PFLU_RS29720	0.65	+0.7
6,605,369	+		PFLU_RS29720	0.65	+0.4
6,605,369	+		PFLU_RS29720	0.65	-0.2
6,605,369	+		PFLU_RS29720	0.65	+1.7
6,605,369	+		PFLU_RS29720	0.65	-0.8
6,605,370	-		PFLU_RS29720	0.65	+0.2
6,605,370	-		PFLU_RS29720	0.65	+0.3
6,605,370	-		PFLU_RS29720	0.65	+1.2
6,605,370	-		PFLU_RS29720	0.65	+0.6
6,605,370	-		PFLU_RS29720	0.65	+1.9
6,605,370	-		PFLU_RS29720	0.65	-0.6
6,605,370	-		PFLU_RS29720	0.65	+1.0
6,605,370	-		PFLU_RS29720	0.65	-1.0
6,605,370	-		PFLU_RS29720	0.65	+0.3
6,605,370	-		PFLU_RS29720	0.65	+0.2
6,605,370	-		PFLU_RS29720	0.65	+0.5
6,605,370	-		PFLU_RS29720	0.65	-0.1
6,605,370	-		PFLU_RS29720	0.65	-1.1
6,605,495	+				+0.0
6,605,495	+				-0.9
6,605,495	+				-0.7
6,605,495	+				+0.1
6,605,495	+				+0.5
6,605,495	+				+0.1
6,605,495	+				+0.9
6,605,495	+				+0.6
6,605,495	+				+0.2
6,605,495	+				+0.4
6,605,495	+				+0.9
6,605,495	+				-0.2
6,605,495	+				-1.4
6,605,496	-				-0.2
6,605,496	-				+0.5
6,605,496	-				-0.5
6,605,496	-				+0.5
6,605,496	-				+0.4
6,605,496	-				+0.0
6,605,496	-				+0.3
6,605,496	-				+0.6
6,605,496	-				-1.9
6,605,496	-				+0.3
6,605,496	-				-0.7
6,605,496	-				-0.2
6,605,496	-				+0.5
6,605,496	-				-2.4
6,605,578	+				-0.7
6,605,583	+				-0.9
6,605,583	+				+0.2
6,605,583	+				-2.1
6,605,583	+				-0.6
6,605,583	+				-0.3
6,605,583	+				+0.4
6,605,584	-				+0.1
6,605,584	-				+0.4
6,605,584	-				-0.6
6,605,584	-				-0.6
6,605,584	-				+0.1
6,605,584	-				+2.3
6,605,584	-				-0.2
6,605,602	+				-0.3
6,605,602	+				-1.1
6,605,602	+				+0.7
6,605,602	+				-0.4
6,605,603	-				-0.9
6,605,603	-				-1.1
6,605,603	-				-1.9
6,605,611	+				+1.1
6,605,615	+				-0.9
6,605,615	+				+1.3
6,605,615	+				-0.1
6,605,615	+				-0.4
6,605,615	+				-1.1
6,605,615	+				+1.5
6,605,615	+				-1.0
6,605,615	+				-0.9
6,605,615	+				-0.3
6,605,616	-				-0.7
6,605,616	-				-1.7
6,605,616	-				-2.4
6,605,616	-				+0.1
6,605,616	-				-0.6
6,605,616	-				-1.1
6,605,616	-				-0.7
6,605,616	-				-0.7
6,605,616	-				+0.1
6,605,616	-				-0.8
6,605,616	-				-1.1
6,605,616	-				-1.0
6,605,616	-				-0.1
6,605,616	-				-1.1
6,605,616	-				-0.4
6,605,634	+				+0.5
6,605,634	+				-0.1
6,605,634	+				-0.1
6,605,634	+				+0.8
6,605,635	-				-0.1
6,605,635	-				-1.6
6,605,635	-				-1.3
6,605,635	-				-1.2
6,605,635	-				-1.1
6,605,635	-				-1.6
6,605,635	-				-1.7
6,605,635	-				-0.9
6,605,739	+		PFLU_RS29725	0.12	-3.5
6,605,739	+		PFLU_RS29725	0.12	-2.0
6,605,739	+		PFLU_RS29725	0.12	-1.9
6,605,739	+		PFLU_RS29725	0.12	+0.3
6,605,784	-		PFLU_RS29725	0.18	-0.7
6,605,964	+		PFLU_RS29725	0.44	-1.6
6,605,964	+		PFLU_RS29725	0.44	-1.5
6,605,964	+		PFLU_RS29725	0.44	-1.4
6,605,964	+		PFLU_RS29725	0.44	-2.1
6,605,964	+		PFLU_RS29725	0.44	-1.3
6,605,964	+		PFLU_RS29725	0.44	-2.4
6,605,964	+		PFLU_RS29725	0.44	-2.5
6,605,964	+		PFLU_RS29725	0.44	-0.9
6,605,964	+		PFLU_RS29725	0.44	-2.1
6,605,964	+		PFLU_RS29725	0.44	-1.3
6,605,964	+		PFLU_RS29725	0.44	-1.5
6,605,964	+		PFLU_RS29725	0.44	-0.5
6,605,964	+		PFLU_RS29725	0.44	-1.3
6,605,964	+		PFLU_RS29725	0.44	-1.8
6,605,964	+		PFLU_RS29725	0.44	-0.7
6,605,964	+		PFLU_RS29725	0.44	+0.1
6,605,964	+		PFLU_RS29725	0.44	-1.8
6,605,964	+		PFLU_RS29725	0.44	-1.6
6,605,964	+		PFLU_RS29725	0.44	-1.5
6,605,964	+		PFLU_RS29725	0.44	-4.2
6,605,964	+		PFLU_RS29725	0.44	-2.0
6,605,965	-		PFLU_RS29725	0.44	+0.0
6,605,965	-		PFLU_RS29725	0.44	-1.7
6,605,965	-		PFLU_RS29725	0.44	+0.1
6,605,965	-		PFLU_RS29725	0.44	-1.0
6,605,965	-		PFLU_RS29725	0.44	-1.9
6,605,965	-		PFLU_RS29725	0.44	-0.4
6,605,965	-		PFLU_RS29725	0.44	-2.6
6,605,965	-		PFLU_RS29725	0.44	-0.7
6,605,965	-		PFLU_RS29725	0.44	-1.3
6,605,965	-		PFLU_RS29725	0.44	-1.1
6,605,965	-		PFLU_RS29725	0.44	-1.7
6,605,965	-		PFLU_RS29725	0.44	-1.1
6,605,965	-		PFLU_RS29725	0.44	+0.1
6,605,965	-		PFLU_RS29725	0.44	-0.9
6,605,965	-		PFLU_RS29725	0.44	-2.3
6,605,965	-		PFLU_RS29725	0.44	-2.3
6,605,965	-		PFLU_RS29725	0.44	-2.3
6,605,965	-		PFLU_RS29725	0.44	-1.4
6,606,016	+		PFLU_RS29725	0.52	-2.6
6,606,138	+		PFLU_RS29725	0.70	+1.9
6,606,180	+		PFLU_RS29725	0.76	-1.9
6,606,180	+		PFLU_RS29725	0.76	-1.0
6,606,180	+		PFLU_RS29725	0.76	-3.3
6,606,181	-		PFLU_RS29725	0.76	-2.5
6,606,181	-		PFLU_RS29725	0.76	-1.0
6,606,181	-		PFLU_RS29725	0.76	-1.5
6,606,181	-		PFLU_RS29725	0.76	-2.1
6,606,181	-		PFLU_RS29725	0.76	+0.9
6,606,181	-		PFLU_RS29725	0.76	-1.7
6,606,181	-		PFLU_RS29725	0.76	-1.4
6,606,225	+		PFLU_RS29725	0.82	-0.7
6,606,225	+		PFLU_RS29725	0.82	-0.9
6,606,225	+		PFLU_RS29725	0.82	-3.6
6,606,225	+		PFLU_RS29725	0.82	-2.4
6,606,225	+		PFLU_RS29725	0.82	-0.3
6,606,225	+		PFLU_RS29725	0.82	-2.1
6,606,225	+		PFLU_RS29725	0.82	-2.0
6,606,225	+		PFLU_RS29725	0.82	-3.1
6,606,225	+		PFLU_RS29725	0.82	-2.9
6,606,225	+		PFLU_RS29725	0.82	-3.1
6,606,225	+		PFLU_RS29725	0.82	-2.5
6,606,225	+		PFLU_RS29725	0.82	-1.3
6,606,225	+		PFLU_RS29725	0.82	-0.9
6,606,225	+		PFLU_RS29725	0.82	-3.9
6,606,225	+		PFLU_RS29725	0.82	-2.6
6,606,225	+		PFLU_RS29725	0.82	-2.4
6,606,225	+		PFLU_RS29725	0.82	-1.9
6,606,225	+		PFLU_RS29725	0.82	-1.9
6,606,226	-		PFLU_RS29725	0.82	-2.9
6,606,226	-		PFLU_RS29725	0.82	-1.9
6,606,226	-		PFLU_RS29725	0.82	-1.0
6,606,226	-		PFLU_RS29725	0.82	-3.5
6,606,226	-		PFLU_RS29725	0.82	-2.0
6,606,226	-		PFLU_RS29725	0.82	-2.6
6,606,226	-		PFLU_RS29725	0.82	-2.5
6,606,226	-		PFLU_RS29725	0.82	-2.8
6,606,226	-		PFLU_RS29725	0.82	-2.3
6,606,226	-		PFLU_RS29725	0.82	-2.4
6,606,226	-		PFLU_RS29725	0.82	+0.3
6,606,226	-		PFLU_RS29725	0.82	-2.7
6,606,226	-		PFLU_RS29725	0.82	-3.3
6,606,226	-		PFLU_RS29725	0.82	-3.0
6,606,226	-		PFLU_RS29725	0.82	-2.1
6,606,226	-		PFLU_RS29725	0.82	-3.5
6,606,289	-				-2.8
6,606,301	+				-0.0
6,606,358	+				-1.6
6,606,359	-				+0.4
6,606,461	+				-1.1
6,606,461	+				-1.2
6,606,461	+				-0.6
6,606,461	+				-1.3
6,606,461	+				-1.2
6,606,461	+				-1.4
6,606,461	+				-2.9
6,606,461	+				-0.2
6,606,461	+				-2.0
6,606,461	+				-1.8
6,606,461	+				-2.4
6,606,462	-				+0.0
6,606,462	-				-0.3
6,606,462	-				-0.1
6,606,462	-				-0.4
6,606,462	-				-0.6
6,606,462	-				+0.2
6,606,462	-				+0.9
6,606,469	+				-0.8
6,606,469	+				-2.9
6,606,470	-				+0.3
6,606,472	+				+0.3
6,606,472	+				-1.7
6,606,472	+				-0.7
6,606,473	-				-0.3
6,606,473	-				-1.0
6,606,505	+				+3.5
6,606,505	+				-1.9
6,606,506	-				+0.0
6,606,506	-				-1.9
6,606,506	-				-1.3
6,606,622	+		PFLU_RS29730	0.18	-2.8
6,606,622	+		PFLU_RS29730	0.18	-0.2
6,606,622	+		PFLU_RS29730	0.18	-1.3
6,606,622	+		PFLU_RS29730	0.18	-1.3
6,606,622	+		PFLU_RS29730	0.18	-0.8
6,606,622	+		PFLU_RS29730	0.18	-1.1
6,606,622	+		PFLU_RS29730	0.18	-2.8
6,606,623	-		PFLU_RS29730	0.18	-0.8
6,606,623	-		PFLU_RS29730	0.18	-1.4
6,606,623	-		PFLU_RS29730	0.18	-1.3
6,606,623	-		PFLU_RS29730	0.18	-0.6
6,606,623	-		PFLU_RS29730	0.18	-1.2
6,606,623	-		PFLU_RS29730	0.18	-0.9
6,606,623	-		PFLU_RS29730	0.18	-1.6
6,606,623	-		PFLU_RS29730	0.18	-1.1
6,606,623	-		PFLU_RS29730	0.18	-0.4
6,606,623	-		PFLU_RS29730	0.18	-1.4
6,606,623	-		PFLU_RS29730	0.18	-2.2
6,606,623	-		PFLU_RS29730	0.18	-2.4
6,606,623	-		PFLU_RS29730	0.18	-0.8
6,606,847	+		PFLU_RS29730	0.35	-2.3
6,606,847	+		PFLU_RS29730	0.35	+0.1
6,606,847	+		PFLU_RS29730	0.35	+0.3
6,606,848	-		PFLU_RS29730	0.35	-1.6
6,606,848	-		PFLU_RS29730	0.35	-0.9
6,606,848	-		PFLU_RS29730	0.35	-1.5
6,606,865	+		PFLU_RS29730	0.36	+1.3
6,606,865	+		PFLU_RS29730	0.36	-1.8
6,606,865	+		PFLU_RS29730	0.36	-0.3
6,606,865	+		PFLU_RS29730	0.36	-0.4
6,606,865	+		PFLU_RS29730	0.36	+0.0
6,606,865	+		PFLU_RS29730	0.36	-1.3
6,606,865	+		PFLU_RS29730	0.36	+0.4
6,606,865	+		PFLU_RS29730	0.36	-1.4
6,606,865	+		PFLU_RS29730	0.36	+0.2
6,606,866	-		PFLU_RS29730	0.36	-1.9
6,606,866	-		PFLU_RS29730	0.36	-0.3
6,606,866	-		PFLU_RS29730	0.36	-0.9
6,606,866	-		PFLU_RS29730	0.36	-1.9
6,606,866	-		PFLU_RS29730	0.36	-0.3
6,606,866	-		PFLU_RS29730	0.36	-1.7
6,606,866	-		PFLU_RS29730	0.36	-2.2
6,606,866	-		PFLU_RS29730	0.36	-0.7
6,606,866	-		PFLU_RS29730	0.36	-1.1
6,606,866	-		PFLU_RS29730	0.36	-1.5
6,606,909	-		PFLU_RS29730	0.40	-3.1
6,606,922	+		PFLU_RS29730	0.41	-1.4
6,606,922	+		PFLU_RS29730	0.41	-1.4
6,606,922	+		PFLU_RS29730	0.41	-0.3
6,606,923	-		PFLU_RS29730	0.41	-2.6
6,606,934	+		PFLU_RS29730	0.41	-1.8
6,606,935	-		PFLU_RS29730	0.42	-2.5
6,606,963	-		PFLU_RS29730	0.44	-2.9
6,607,039	-		PFLU_RS29730	0.49	-2.1