Experiment: sodium fluoride 60 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS14520 and ABZR86_RS14525 are separated by 77 nucleotides ABZR86_RS14525 and ABZR86_RS14530 overlap by 8 nucleotides ABZR86_RS14530 and ABZR86_RS14535 are separated by 40 nucleotides ABZR86_RS14535 and ABZR86_RS14540 are separated by 52 nucleotides ABZR86_RS14540 and ABZR86_RS14545 overlap by 4 nucleotides
ABZR86_RS14520: ABZR86_RS14520 - tail fiber protein, at 3,255,231 to 3,255,770
_RS14520
ABZR86_RS14525: ABZR86_RS14525 - GNAT family N-acetyltransferase, at 3,255,848 to 3,256,330
_RS14525
ABZR86_RS14530: ABZR86_RS14530 - hypothetical protein, at 3,256,323 to 3,256,619
_RS14530
ABZR86_RS14535: ABZR86_RS14535 - hypothetical protein, at 3,256,660 to 3,256,887
_RS14535
ABZR86_RS14540: ABZR86_RS14540 - glutathione S-transferase family protein, at 3,256,940 to 3,257,554
_RS14540
ABZR86_RS14545: ABZR86_RS14545 - pyridoxal-phosphate dependent enzyme, at 3,257,551 to 3,258,501
_RS14545
Position (kb) 3256
3257 Strain fitness (log2 ratio) -2
-1
0
1 at 3255.714 kb on + strand, within ABZR86_RS14520 at 3255.899 kb on + strand, within ABZR86_RS14525 at 3255.909 kb on + strand, within ABZR86_RS14525 at 3255.909 kb on + strand, within ABZR86_RS14525 at 3255.910 kb on - strand, within ABZR86_RS14525 at 3255.910 kb on - strand, within ABZR86_RS14525 at 3255.998 kb on + strand, within ABZR86_RS14525 at 3255.998 kb on + strand, within ABZR86_RS14525 at 3255.999 kb on - strand, within ABZR86_RS14525 at 3255.999 kb on - strand, within ABZR86_RS14525 at 3255.999 kb on - strand, within ABZR86_RS14525 at 3255.999 kb on - strand, within ABZR86_RS14525 at 3256.025 kb on + strand, within ABZR86_RS14525 at 3256.067 kb on + strand, within ABZR86_RS14525 at 3256.067 kb on + strand, within ABZR86_RS14525 at 3256.495 kb on + strand, within ABZR86_RS14530 at 3256.703 kb on + strand, within ABZR86_RS14535 at 3256.704 kb on - strand, within ABZR86_RS14535 at 3256.886 kb on - strand at 3257.004 kb on + strand, within ABZR86_RS14540 at 3257.005 kb on - strand, within ABZR86_RS14540 at 3257.005 kb on - strand, within ABZR86_RS14540 at 3257.163 kb on + strand, within ABZR86_RS14540 at 3257.422 kb on - strand, within ABZR86_RS14540 at 3257.542 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction sodium fluoride 60 mM remove 3,255,714 + ABZR86_RS14520 0.89 +0.2 3,255,899 + ABZR86_RS14525 0.11 +0.1 3,255,909 + ABZR86_RS14525 0.13 -0.1 3,255,909 + ABZR86_RS14525 0.13 +0.4 3,255,910 - ABZR86_RS14525 0.13 -0.1 3,255,910 - ABZR86_RS14525 0.13 -0.1 3,255,998 + ABZR86_RS14525 0.31 -2.0 3,255,998 + ABZR86_RS14525 0.31 +0.0 3,255,999 - ABZR86_RS14525 0.31 -0.3 3,255,999 - ABZR86_RS14525 0.31 -0.8 3,255,999 - ABZR86_RS14525 0.31 -0.2 3,255,999 - ABZR86_RS14525 0.31 -0.1 3,256,025 + ABZR86_RS14525 0.37 -0.3 3,256,067 + ABZR86_RS14525 0.45 -0.1 3,256,067 + ABZR86_RS14525 0.45 +0.2 3,256,495 + ABZR86_RS14530 0.58 +0.2 3,256,703 + ABZR86_RS14535 0.19 +0.3 3,256,704 - ABZR86_RS14535 0.19 +0.3 3,256,886 - -0.2 3,257,004 + ABZR86_RS14540 0.10 -0.3 3,257,005 - ABZR86_RS14540 0.11 -0.1 3,257,005 - ABZR86_RS14540 0.11 +0.8 3,257,163 + ABZR86_RS14540 0.36 +1.3 3,257,422 - ABZR86_RS14540 0.78 +0.9 3,257,542 - -0.1
Or see this region's nucleotide sequence