Experiment: sodium fluoride 60 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS10645 and ABZR86_RS10650 are separated by 143 nucleotides ABZR86_RS10650 and ABZR86_RS10655 are separated by 39 nucleotides ABZR86_RS10655 and ABZR86_RS10660 overlap by 1 nucleotides ABZR86_RS10660 and ABZR86_RS10665 overlap by 1 nucleotides ABZR86_RS10665 and ABZR86_RS10670 are separated by 38 nucleotides
ABZR86_RS10645: ABZR86_RS10645 - thiamine-phosphate kinase, at 2,367,514 to 2,368,488
_RS10645
ABZR86_RS10650: ABZR86_RS10650 - nuclear transport factor 2 family protein, at 2,368,632 to 2,369,105
_RS10650
ABZR86_RS10655: ABZR86_RS10655 - GNAT family N-acetyltransferase, at 2,369,145 to 2,369,678
_RS10655
ABZR86_RS10660: ABZR86_RS10660 - transcription antitermination factor NusB, at 2,369,678 to 2,370,124
_RS10660
ABZR86_RS10665: ABZR86_RS10665 - 6,7-dimethyl-8-ribityllumazine synthase, at 2,370,124 to 2,370,591
_RS10665
ABZR86_RS10670: ABZR86_RS10670 - muramoyltetrapeptide carboxypeptidase, at 2,370,630 to 2,371,589
_RS10670
Position (kb)
2369
2370 Strain fitness (log2 ratio)
-2
-1
0
1 at 2368.565 kb on + strand at 2368.565 kb on + strand at 2368.565 kb on + strand at 2368.566 kb on - strand at 2368.566 kb on - strand at 2368.597 kb on - strand at 2368.612 kb on - strand at 2368.612 kb on - strand at 2368.693 kb on + strand, within ABZR86_RS10650 at 2368.738 kb on + strand, within ABZR86_RS10650 at 2368.863 kb on + strand, within ABZR86_RS10650 at 2368.864 kb on - strand, within ABZR86_RS10650 at 2368.864 kb on - strand, within ABZR86_RS10650 at 2368.874 kb on + strand, within ABZR86_RS10650 at 2368.974 kb on + strand, within ABZR86_RS10650 at 2368.974 kb on + strand, within ABZR86_RS10650 at 2369.104 kb on - strand at 2369.146 kb on + strand at 2369.146 kb on + strand at 2369.146 kb on + strand at 2369.146 kb on + strand at 2369.146 kb on + strand at 2369.147 kb on - strand at 2369.147 kb on - strand at 2369.147 kb on - strand at 2369.147 kb on - strand at 2369.147 kb on - strand at 2369.147 kb on - strand at 2369.434 kb on + strand, within ABZR86_RS10655 at 2369.435 kb on - strand, within ABZR86_RS10655 at 2369.435 kb on - strand, within ABZR86_RS10655 at 2370.590 kb on - strand at 2370.607 kb on - strand at 2370.607 kb on - strand at 2370.607 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction sodium fluoride 60 mM remove 2,368,565 + +0.5 2,368,565 + -0.0 2,368,565 + +0.3 2,368,566 - -0.6 2,368,566 - -2.0 2,368,597 - +0.6 2,368,612 - -0.2 2,368,612 - -0.0 2,368,693 + ABZR86_RS10650 0.13 +0.2 2,368,738 + ABZR86_RS10650 0.22 -0.1 2,368,863 + ABZR86_RS10650 0.49 +0.2 2,368,864 - ABZR86_RS10650 0.49 +0.4 2,368,864 - ABZR86_RS10650 0.49 +0.1 2,368,874 + ABZR86_RS10650 0.51 -0.5 2,368,974 + ABZR86_RS10650 0.72 -0.5 2,368,974 + ABZR86_RS10650 0.72 -1.2 2,369,104 - -0.6 2,369,146 + -0.1 2,369,146 + +0.8 2,369,146 + +0.0 2,369,146 + -0.6 2,369,146 + +0.4 2,369,147 - -0.8 2,369,147 - -0.7 2,369,147 - +0.5 2,369,147 - +0.1 2,369,147 - -0.4 2,369,147 - -0.2 2,369,434 + ABZR86_RS10655 0.54 +0.4 2,369,435 - ABZR86_RS10655 0.54 -0.4 2,369,435 - ABZR86_RS10655 0.54 +0.9 2,370,590 - -0.3 2,370,607 - -0.1 2,370,607 - +0.1 2,370,607 - +0.5
Or see this region's nucleotide sequence