Experiment: sodium fluoride 60 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS08240 and ABZR86_RS08245 overlap by 8 nucleotides ABZR86_RS08245 and ABZR86_RS08250 are separated by 49 nucleotides ABZR86_RS08250 and ABZR86_RS08255 are separated by 125 nucleotides ABZR86_RS08255 and ABZR86_RS08260 are separated by 176 nucleotides ABZR86_RS08260 and ABZR86_RS08265 overlap by 4 nucleotides
ABZR86_RS08240: ABZR86_RS08240 - phosphate ABC transporter permease PstA, at 1,834,485 to 1,835,357
_RS08240
ABZR86_RS08245: ABZR86_RS08245 - phosphate ABC transporter ATP-binding protein PstB, at 1,835,350 to 1,836,156
_RS08245
ABZR86_RS08250: ABZR86_RS08250 - phosphate signaling complex protein PhoU, at 1,836,206 to 1,836,940
_RS08250
ABZR86_RS08255: ABZR86_RS08255 - quaternary ammonium compound efflux SMR transporter SugE, at 1,837,066 to 1,837,389
_RS08255
ABZR86_RS08260: ABZR86_RS08260 - hypothetical protein, at 1,837,566 to 1,837,847
_RS08260
ABZR86_RS08265: ABZR86_RS08265 - 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB, at 1,837,844 to 1,838,590
_RS08265
Position (kb)
1836
1837 Strain fitness (log2 ratio)
-2
-1
0
1 at 1836.206 kb on - strand at 1836.206 kb on - strand at 1836.206 kb on - strand at 1836.242 kb on + strand at 1836.242 kb on + strand at 1836.243 kb on - strand at 1836.243 kb on - strand at 1836.665 kb on + strand, within ABZR86_RS08250 at 1836.704 kb on + strand, within ABZR86_RS08250 at 1836.734 kb on + strand, within ABZR86_RS08250 at 1836.735 kb on - strand, within ABZR86_RS08250 at 1836.994 kb on - strand at 1836.994 kb on - strand at 1837.325 kb on + strand, within ABZR86_RS08255 at 1837.325 kb on + strand, within ABZR86_RS08255 at 1837.325 kb on + strand, within ABZR86_RS08255 at 1837.326 kb on - strand, within ABZR86_RS08255 at 1837.376 kb on + strand at 1837.376 kb on + strand at 1837.376 kb on + strand at 1837.376 kb on + strand at 1837.377 kb on - strand at 1837.377 kb on - strand at 1837.377 kb on - strand at 1837.479 kb on + strand at 1837.479 kb on + strand at 1837.480 kb on - strand at 1837.531 kb on + strand at 1837.531 kb on + strand at 1837.532 kb on - strand at 1837.532 kb on - strand at 1837.532 kb on - strand at 1837.532 kb on - strand at 1837.532 kb on - strand at 1837.631 kb on - strand, within ABZR86_RS08260 at 1837.631 kb on - strand, within ABZR86_RS08260 at 1837.631 kb on - strand, within ABZR86_RS08260 at 1837.631 kb on - strand, within ABZR86_RS08260 at 1837.631 kb on - strand, within ABZR86_RS08260 at 1837.741 kb on + strand, within ABZR86_RS08260 at 1837.742 kb on - strand, within ABZR86_RS08260 at 1837.841 kb on + strand at 1837.842 kb on - strand at 1837.842 kb on - strand at 1837.842 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction sodium fluoride 60 mM remove 1,836,206 - +0.5 1,836,206 - -0.4 1,836,206 - -0.4 1,836,242 + +0.1 1,836,242 + +0.3 1,836,243 - -0.5 1,836,243 - +0.4 1,836,665 + ABZR86_RS08250 0.62 -1.6 1,836,704 + ABZR86_RS08250 0.68 -1.6 1,836,734 + ABZR86_RS08250 0.72 -2.1 1,836,735 - ABZR86_RS08250 0.72 -1.5 1,836,994 - +0.3 1,836,994 - -0.7 1,837,325 + ABZR86_RS08255 0.80 -0.4 1,837,325 + ABZR86_RS08255 0.80 -0.0 1,837,325 + ABZR86_RS08255 0.80 +0.4 1,837,326 - ABZR86_RS08255 0.80 +0.3 1,837,376 + -0.0 1,837,376 + +0.9 1,837,376 + +0.2 1,837,376 + -0.3 1,837,377 - -0.1 1,837,377 - -0.4 1,837,377 - -0.3 1,837,479 + -0.0 1,837,479 + +0.8 1,837,480 - -0.4 1,837,531 + +0.8 1,837,531 + +0.2 1,837,532 - -0.1 1,837,532 - +0.2 1,837,532 - -0.7 1,837,532 - +0.1 1,837,532 - -0.7 1,837,631 - ABZR86_RS08260 0.23 -1.0 1,837,631 - ABZR86_RS08260 0.23 +0.3 1,837,631 - ABZR86_RS08260 0.23 -0.3 1,837,631 - ABZR86_RS08260 0.23 -0.5 1,837,631 - ABZR86_RS08260 0.23 -0.2 1,837,741 + ABZR86_RS08260 0.62 -0.1 1,837,742 - ABZR86_RS08260 0.62 -0.1 1,837,841 + -0.3 1,837,842 - -0.5 1,837,842 - -0.5 1,837,842 - -0.1
Or see this region's nucleotide sequence