Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS03570

Experiment: sodium fluoride 60 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR86_RS03560 and ABZR86_RS03565 overlap by 4 nucleotidesABZR86_RS03565 and ABZR86_RS03570 are separated by 291 nucleotidesABZR86_RS03570 and ABZR86_RS03575 overlap by 4 nucleotidesABZR86_RS03575 and ABZR86_RS03580 overlap by 1 nucleotides ABZR86_RS03560: ABZR86_RS03560 - molybdenum cofactor guanylyltransferase, at 760,862 to 761,434 _RS03560 ABZR86_RS03565: ABZR86_RS03565 - hypothetical protein, at 761,431 to 761,775 _RS03565 ABZR86_RS03570: ABZR86_RS03570 - extracellular solute-binding protein, at 762,067 to 762,978 _RS03570 ABZR86_RS03575: ABZR86_RS03575 - ABC transporter permease subunit, at 762,975 to 763,757 _RS03575 ABZR86_RS03580: ABZR86_RS03580 - ABC transporter ATP-binding protein, at 763,757 to 764,752 _RS03580 Position (kb) 762 763Strain fitness (log2 ratio) -1 0 1at 761.402 kb on - strandat 761.999 kb on + strandat 761.999 kb on + strandat 761.999 kb on + strandat 762.000 kb on - strandat 762.000 kb on - strandat 762.406 kb on + strand, within ABZR86_RS03570at 762.406 kb on + strand, within ABZR86_RS03570at 762.406 kb on + strand, within ABZR86_RS03570at 762.406 kb on + strand, within ABZR86_RS03570at 762.406 kb on + strand, within ABZR86_RS03570at 762.469 kb on + strand, within ABZR86_RS03570at 762.470 kb on - strand, within ABZR86_RS03570at 762.470 kb on - strand, within ABZR86_RS03570at 762.571 kb on + strand, within ABZR86_RS03570at 762.571 kb on + strand, within ABZR86_RS03570at 762.571 kb on + strand, within ABZR86_RS03570at 762.571 kb on + strand, within ABZR86_RS03570at 762.571 kb on + strand, within ABZR86_RS03570at 762.571 kb on + strand, within ABZR86_RS03570at 762.571 kb on + strand, within ABZR86_RS03570at 762.571 kb on + strand, within ABZR86_RS03570at 762.572 kb on - strand, within ABZR86_RS03570at 762.572 kb on - strand, within ABZR86_RS03570at 762.572 kb on - strand, within ABZR86_RS03570at 762.572 kb on - strand, within ABZR86_RS03570at 762.572 kb on - strand, within ABZR86_RS03570at 762.572 kb on - strand, within ABZR86_RS03570at 762.572 kb on - strand, within ABZR86_RS03570at 762.572 kb on - strand, within ABZR86_RS03570at 762.572 kb on - strand, within ABZR86_RS03570at 762.572 kb on - strand, within ABZR86_RS03570at 762.574 kb on + strand, within ABZR86_RS03570at 762.574 kb on + strand, within ABZR86_RS03570at 762.574 kb on + strand, within ABZR86_RS03570at 762.575 kb on - strand, within ABZR86_RS03570at 762.575 kb on - strand, within ABZR86_RS03570at 762.575 kb on - strand, within ABZR86_RS03570at 762.848 kb on - strand, within ABZR86_RS03570at 763.146 kb on + strand, within ABZR86_RS03575at 763.147 kb on - strand, within ABZR86_RS03575at 763.305 kb on + strand, within ABZR86_RS03575at 763.305 kb on + strand, within ABZR86_RS03575at 763.305 kb on + strand, within ABZR86_RS03575at 763.305 kb on + strand, within ABZR86_RS03575at 763.305 kb on + strand, within ABZR86_RS03575at 763.305 kb on + strand, within ABZR86_RS03575at 763.305 kb on + strand, within ABZR86_RS03575at 763.306 kb on - strand, within ABZR86_RS03575at 763.306 kb on - strand, within ABZR86_RS03575at 763.306 kb on - strand, within ABZR86_RS03575at 763.306 kb on - strand, within ABZR86_RS03575at 763.395 kb on + strand, within ABZR86_RS03575at 763.395 kb on + strand, within ABZR86_RS03575at 763.396 kb on - strand, within ABZR86_RS03575at 763.396 kb on - strand, within ABZR86_RS03575at 763.410 kb on + strand, within ABZR86_RS03575at 763.411 kb on - strand, within ABZR86_RS03575at 763.411 kb on - strand, within ABZR86_RS03575at 763.411 kb on - strand, within ABZR86_RS03575at 763.413 kb on + strand, within ABZR86_RS03575at 763.413 kb on + strand, within ABZR86_RS03575at 763.413 kb on + strand, within ABZR86_RS03575at 763.413 kb on + strand, within ABZR86_RS03575at 763.413 kb on + strand, within ABZR86_RS03575at 763.414 kb on - strand, within ABZR86_RS03575at 763.414 kb on - strand, within ABZR86_RS03575at 763.414 kb on - strand, within ABZR86_RS03575at 763.414 kb on - strand, within ABZR86_RS03575at 763.486 kb on - strand, within ABZR86_RS03575at 763.609 kb on - strand, within ABZR86_RS03575at 763.609 kb on - strand, within ABZR86_RS03575at 763.609 kb on - strand, within ABZR86_RS03575at 763.609 kb on - strand, within ABZR86_RS03575at 763.674 kb on + strand, within ABZR86_RS03575at 763.674 kb on + strand, within ABZR86_RS03575at 763.943 kb on + strand, within ABZR86_RS03580at 763.943 kb on + strand, within ABZR86_RS03580

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Per-strain Table

Position Strand Gene LocusTag Fraction sodium fluoride 60 mM
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761,402 - -0.2
761,999 + +0.1
761,999 + -0.6
761,999 + +0.1
762,000 - -0.5
762,000 - -0.1
762,406 + ABZR86_RS03570 0.37 +0.2
762,406 + ABZR86_RS03570 0.37 +0.2
762,406 + ABZR86_RS03570 0.37 +0.1
762,406 + ABZR86_RS03570 0.37 -0.6
762,406 + ABZR86_RS03570 0.37 -0.3
762,469 + ABZR86_RS03570 0.44 -0.7
762,470 - ABZR86_RS03570 0.44 -0.4
762,470 - ABZR86_RS03570 0.44 -0.4
762,571 + ABZR86_RS03570 0.55 -0.7
762,571 + ABZR86_RS03570 0.55 -0.3
762,571 + ABZR86_RS03570 0.55 -0.3
762,571 + ABZR86_RS03570 0.55 +1.4
762,571 + ABZR86_RS03570 0.55 -0.3
762,571 + ABZR86_RS03570 0.55 -0.0
762,571 + ABZR86_RS03570 0.55 -1.6
762,571 + ABZR86_RS03570 0.55 +0.1
762,572 - ABZR86_RS03570 0.55 -0.5
762,572 - ABZR86_RS03570 0.55 -0.4
762,572 - ABZR86_RS03570 0.55 -0.5
762,572 - ABZR86_RS03570 0.55 +0.4
762,572 - ABZR86_RS03570 0.55 -0.1
762,572 - ABZR86_RS03570 0.55 +0.1
762,572 - ABZR86_RS03570 0.55 -0.1
762,572 - ABZR86_RS03570 0.55 -1.2
762,572 - ABZR86_RS03570 0.55 -1.1
762,572 - ABZR86_RS03570 0.55 +0.5
762,574 + ABZR86_RS03570 0.56 +0.5
762,574 + ABZR86_RS03570 0.56 -0.2
762,574 + ABZR86_RS03570 0.56 +0.1
762,575 - ABZR86_RS03570 0.56 +0.3
762,575 - ABZR86_RS03570 0.56 +0.7
762,575 - ABZR86_RS03570 0.56 -0.2
762,848 - ABZR86_RS03570 0.86 -0.6
763,146 + ABZR86_RS03575 0.22 -0.6
763,147 - ABZR86_RS03575 0.22 +0.2
763,305 + ABZR86_RS03575 0.42 +0.3
763,305 + ABZR86_RS03575 0.42 -0.4
763,305 + ABZR86_RS03575 0.42 -0.8
763,305 + ABZR86_RS03575 0.42 -0.1
763,305 + ABZR86_RS03575 0.42 +0.2
763,305 + ABZR86_RS03575 0.42 +0.3
763,305 + ABZR86_RS03575 0.42 +1.6
763,306 - ABZR86_RS03575 0.42 +0.2
763,306 - ABZR86_RS03575 0.42 +0.6
763,306 - ABZR86_RS03575 0.42 +0.3
763,306 - ABZR86_RS03575 0.42 +0.0
763,395 + ABZR86_RS03575 0.54 +0.3
763,395 + ABZR86_RS03575 0.54 -1.0
763,396 - ABZR86_RS03575 0.54 -0.1
763,396 - ABZR86_RS03575 0.54 -0.5
763,410 + ABZR86_RS03575 0.56 -0.2
763,411 - ABZR86_RS03575 0.56 -0.5
763,411 - ABZR86_RS03575 0.56 -0.2
763,411 - ABZR86_RS03575 0.56 -0.4
763,413 + ABZR86_RS03575 0.56 +0.4
763,413 + ABZR86_RS03575 0.56 +0.4
763,413 + ABZR86_RS03575 0.56 -0.5
763,413 + ABZR86_RS03575 0.56 +0.3
763,413 + ABZR86_RS03575 0.56 -0.4
763,414 - ABZR86_RS03575 0.56 -0.1
763,414 - ABZR86_RS03575 0.56 +0.9
763,414 - ABZR86_RS03575 0.56 -0.5
763,414 - ABZR86_RS03575 0.56 +0.0
763,486 - ABZR86_RS03575 0.65 +0.1
763,609 - ABZR86_RS03575 0.81 +0.2
763,609 - ABZR86_RS03575 0.81 +0.3
763,609 - ABZR86_RS03575 0.81 +0.6
763,609 - ABZR86_RS03575 0.81 +0.0
763,674 + ABZR86_RS03575 0.89 -0.2
763,674 + ABZR86_RS03575 0.89 -0.4
763,943 + ABZR86_RS03580 0.19 +0.1
763,943 + ABZR86_RS03580 0.19 -0.5

Or see this region's nucleotide sequence