Experiment: sodium fluoride 60 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS03305 and ABZR86_RS03310 are separated by 196 nucleotides ABZR86_RS03310 and ABZR86_RS03315 are separated by 5 nucleotides ABZR86_RS03315 and ABZR86_RS03320 are separated by 39 nucleotides ABZR86_RS03320 and ABZR86_RS03325 overlap by 1 nucleotides ABZR86_RS03325 and ABZR86_RS03330 overlap by 4 nucleotides
ABZR86_RS03305: ABZR86_RS03305 - phage tail sheath C-terminal domain-containing protein, at 695,051 to 696,439
_RS03305
ABZR86_RS03310: ABZR86_RS03310 - phage tail protein, at 696,636 to 697,076
_RS03310
ABZR86_RS03315: ABZR86_RS03315 - phage tail protein, at 697,082 to 697,537
_RS03315
ABZR86_RS03320: ABZR86_RS03320 - DUF5908 family protein, at 697,577 to 697,765
_RS03320
ABZR86_RS03325: ABZR86_RS03325 - hypothetical protein, at 697,765 to 698,490
_RS03325
ABZR86_RS03330: ABZR86_RS03330 - type VI secretion system tip protein VgrG, at 698,487 to 700,253
_RS03330
Position (kb) 697
698 Strain fitness (log2 ratio) -1
0
1 at 696.598 kb on - strand at 696.652 kb on - strand at 697.091 kb on + strand at 697.092 kb on - strand at 697.112 kb on + strand at 697.115 kb on + strand at 697.116 kb on - strand at 697.199 kb on + strand, within ABZR86_RS03315 at 697.268 kb on + strand, within ABZR86_RS03315 at 697.505 kb on + strand at 697.535 kb on + strand at 697.536 kb on - strand at 697.543 kb on - strand at 697.888 kb on + strand, within ABZR86_RS03325 at 697.889 kb on - strand, within ABZR86_RS03325 at 697.901 kb on - strand, within ABZR86_RS03325 at 697.901 kb on - strand, within ABZR86_RS03325 at 697.960 kb on + strand, within ABZR86_RS03325 at 697.961 kb on - strand, within ABZR86_RS03325 at 697.961 kb on - strand, within ABZR86_RS03325 at 697.966 kb on + strand, within ABZR86_RS03325 at 698.179 kb on + strand, within ABZR86_RS03325 at 698.180 kb on - strand, within ABZR86_RS03325 at 698.368 kb on + strand, within ABZR86_RS03325 at 698.372 kb on - strand, within ABZR86_RS03325
Per-strain Table
Position Strand Gene LocusTag Fraction sodium fluoride 60 mM remove 696,598 - +0.5 696,652 - +0.1 697,091 + -1.2 697,092 - +1.1 697,112 + -0.3 697,115 + -0.5 697,116 - +0.1 697,199 + ABZR86_RS03315 0.26 -1.5 697,268 + ABZR86_RS03315 0.41 -0.7 697,505 + -0.4 697,535 + -0.1 697,536 - +0.1 697,543 - +0.9 697,888 + ABZR86_RS03325 0.17 -0.8 697,889 - ABZR86_RS03325 0.17 +0.7 697,901 - ABZR86_RS03325 0.19 +0.2 697,901 - ABZR86_RS03325 0.19 -0.1 697,960 + ABZR86_RS03325 0.27 -0.4 697,961 - ABZR86_RS03325 0.27 -1.2 697,961 - ABZR86_RS03325 0.27 -0.1 697,966 + ABZR86_RS03325 0.28 +0.2 698,179 + ABZR86_RS03325 0.57 -0.0 698,180 - ABZR86_RS03325 0.57 +0.7 698,368 + ABZR86_RS03325 0.83 -0.2 698,372 - ABZR86_RS03325 0.84 +0.8
Or see this region's nucleotide sequence