Experiment: sodium fluoride 60 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS01580 and ABZR86_RS01585 are separated by 292 nucleotides ABZR86_RS01585 and ABZR86_RS01590 are separated by 115 nucleotides ABZR86_RS01590 and ABZR86_RS01595 are separated by 134 nucleotides
ABZR86_RS01580: ABZR86_RS01580 - SDR family oxidoreductase, at 341,523 to 342,284
_RS01580
ABZR86_RS01585: ABZR86_RS01585 - LysR family transcriptional regulator, at 342,577 to 343,578
_RS01585
ABZR86_RS01590: ABZR86_RS01590 - TMEM175 family protein, at 343,694 to 344,338
_RS01590
ABZR86_RS01595: ABZR86_RS01595 - SDR family oxidoreductase, at 344,473 to 345,237
_RS01595
Position (kb) 342
343
344 Strain fitness (log2 ratio) -1
0
1 at 341.656 kb on + strand, within ABZR86_RS01580 at 341.656 kb on + strand, within ABZR86_RS01580 at 341.656 kb on + strand, within ABZR86_RS01580 at 341.657 kb on - strand, within ABZR86_RS01580 at 341.965 kb on + strand, within ABZR86_RS01580 at 341.965 kb on + strand, within ABZR86_RS01580 at 342.330 kb on - strand at 342.330 kb on - strand at 342.467 kb on - strand at 342.654 kb on - strand at 342.654 kb on - strand at 342.654 kb on - strand at 342.654 kb on - strand at 342.701 kb on + strand, within ABZR86_RS01585 at 342.701 kb on + strand, within ABZR86_RS01585 at 342.710 kb on + strand, within ABZR86_RS01585 at 342.774 kb on - strand, within ABZR86_RS01585 at 343.004 kb on + strand, within ABZR86_RS01585 at 343.004 kb on + strand, within ABZR86_RS01585 at 343.004 kb on + strand, within ABZR86_RS01585 at 343.004 kb on + strand, within ABZR86_RS01585 at 343.508 kb on + strand at 343.508 kb on + strand at 343.509 kb on - strand at 343.509 kb on - strand at 343.652 kb on + strand at 343.653 kb on - strand at 343.762 kb on - strand, within ABZR86_RS01590 at 343.953 kb on + strand, within ABZR86_RS01590 at 343.954 kb on - strand, within ABZR86_RS01590 at 343.954 kb on - strand, within ABZR86_RS01590 at 344.115 kb on + strand, within ABZR86_RS01590 at 344.115 kb on + strand, within ABZR86_RS01590 at 344.115 kb on + strand, within ABZR86_RS01590 at 344.115 kb on + strand, within ABZR86_RS01590 at 344.115 kb on + strand, within ABZR86_RS01590 at 344.115 kb on + strand, within ABZR86_RS01590 at 344.116 kb on - strand, within ABZR86_RS01590 at 344.127 kb on + strand, within ABZR86_RS01590 at 344.128 kb on - strand, within ABZR86_RS01590 at 344.145 kb on + strand, within ABZR86_RS01590 at 344.145 kb on + strand, within ABZR86_RS01590 at 344.145 kb on + strand, within ABZR86_RS01590 at 344.146 kb on - strand, within ABZR86_RS01590 at 344.146 kb on - strand, within ABZR86_RS01590 at 344.146 kb on - strand, within ABZR86_RS01590 at 344.146 kb on - strand, within ABZR86_RS01590 at 344.146 kb on - strand, within ABZR86_RS01590 at 344.362 kb on - strand at 344.402 kb on + strand at 344.403 kb on - strand at 344.478 kb on + strand at 344.489 kb on + strand at 344.490 kb on - strand at 344.490 kb on - strand at 344.519 kb on + strand at 344.519 kb on + strand at 344.520 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction sodium fluoride 60 mM remove 341,656 + ABZR86_RS01580 0.17 +0.9 341,656 + ABZR86_RS01580 0.17 -0.2 341,656 + ABZR86_RS01580 0.17 +0.6 341,657 - ABZR86_RS01580 0.18 -0.0 341,965 + ABZR86_RS01580 0.58 -0.0 341,965 + ABZR86_RS01580 0.58 +0.5 342,330 - +0.3 342,330 - -0.0 342,467 - +0.1 342,654 - -0.1 342,654 - +0.1 342,654 - -0.3 342,654 - -0.0 342,701 + ABZR86_RS01585 0.12 +0.9 342,701 + ABZR86_RS01585 0.12 -0.0 342,710 + ABZR86_RS01585 0.13 -0.1 342,774 - ABZR86_RS01585 0.20 +0.0 343,004 + ABZR86_RS01585 0.43 +0.8 343,004 + ABZR86_RS01585 0.43 +0.5 343,004 + ABZR86_RS01585 0.43 +0.2 343,004 + ABZR86_RS01585 0.43 +1.4 343,508 + -0.6 343,508 + -0.1 343,509 - -0.8 343,509 - +0.3 343,652 + +0.1 343,653 - +0.8 343,762 - ABZR86_RS01590 0.11 -0.3 343,953 + ABZR86_RS01590 0.40 +0.2 343,954 - ABZR86_RS01590 0.40 +0.3 343,954 - ABZR86_RS01590 0.40 +0.1 344,115 + ABZR86_RS01590 0.65 -0.2 344,115 + ABZR86_RS01590 0.65 +0.7 344,115 + ABZR86_RS01590 0.65 -0.7 344,115 + ABZR86_RS01590 0.65 +0.7 344,115 + ABZR86_RS01590 0.65 +0.6 344,115 + ABZR86_RS01590 0.65 -0.4 344,116 - ABZR86_RS01590 0.65 +0.0 344,127 + ABZR86_RS01590 0.67 +1.3 344,128 - ABZR86_RS01590 0.67 -0.7 344,145 + ABZR86_RS01590 0.70 +1.0 344,145 + ABZR86_RS01590 0.70 +0.2 344,145 + ABZR86_RS01590 0.70 -0.2 344,146 - ABZR86_RS01590 0.70 +0.8 344,146 - ABZR86_RS01590 0.70 -0.1 344,146 - ABZR86_RS01590 0.70 -0.2 344,146 - ABZR86_RS01590 0.70 +0.7 344,146 - ABZR86_RS01590 0.70 +0.8 344,362 - +0.7 344,402 + +0.2 344,403 - +0.2 344,478 + +0.8 344,489 + -0.7 344,490 - -0.2 344,490 - -0.7 344,519 + -0.6 344,519 + +0.5 344,520 - +0.1
Or see this region's nucleotide sequence