Experiment: Cisplatin 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc04140 and SMc04139 are separated by 23 nucleotides SMc04139 and SMc04138 are separated by 1 nucleotides
SMc04140: SMc04140 - ABC transporter ATP-binding protein, at 131,480 to 132,562
SMc04140
SMc04139: SMc04139 - oxidoreductase, at 132,586 to 133,659
SMc04139
SMc04138: SMc04138 - oxidoreductase, at 133,661 to 134,677
SMc04138
Position (kb) 132
133
134 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 131.896 kb on - strand, within SMc04140 at 131.896 kb on - strand, within SMc04140 at 131.994 kb on + strand, within SMc04140 at 131.994 kb on + strand, within SMc04140 at 131.994 kb on + strand, within SMc04140 at 132.310 kb on - strand, within SMc04140 at 132.310 kb on - strand, within SMc04140 at 132.483 kb on - strand at 132.483 kb on - strand at 132.595 kb on - strand at 132.674 kb on + strand at 132.881 kb on + strand, within SMc04139 at 132.882 kb on - strand, within SMc04139 at 133.096 kb on - strand, within SMc04139 at 133.096 kb on - strand, within SMc04139 at 133.096 kb on - strand, within SMc04139 at 133.096 kb on - strand, within SMc04139 at 133.172 kb on + strand, within SMc04139 at 133.173 kb on - strand, within SMc04139 at 133.173 kb on - strand, within SMc04139 at 133.176 kb on - strand at 133.176 kb on - strand, within SMc04139 at 133.217 kb on + strand, within SMc04139 at 133.218 kb on - strand, within SMc04139 at 133.277 kb on + strand, within SMc04139 at 133.596 kb on - strand at 134.017 kb on + strand, within SMc04138 at 134.017 kb on + strand, within SMc04138 at 134.018 kb on - strand, within SMc04138 at 134.160 kb on + strand, within SMc04138 at 134.311 kb on - strand, within SMc04138 at 134.536 kb on - strand, within SMc04138 at 134.628 kb on + strand at 134.628 kb on + strand at 134.629 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0005 mg/ml remove 131,896 - SMc04140 0.38 +2.2 131,896 - SMc04140 0.38 +0.0 131,994 + SMc04140 0.47 -0.3 131,994 + SMc04140 0.47 -0.4 131,994 + SMc04140 0.47 +1.1 132,310 - SMc04140 0.77 +0.3 132,310 - SMc04140 0.77 +0.6 132,483 - -1.9 132,483 - +0.2 132,595 - -0.9 132,674 + +0.5 132,881 + SMc04139 0.27 -2.4 132,882 - SMc04139 0.28 -0.2 133,096 - SMc04139 0.47 +0.4 133,096 - SMc04139 0.47 -3.3 133,096 - SMc04139 0.47 -2.5 133,096 - SMc04139 0.47 +0.4 133,172 + SMc04139 0.55 +3.7 133,173 - SMc04139 0.55 +0.7 133,173 - SMc04139 0.55 -0.2 133,176 - +1.4 133,176 - SMc04139 0.55 +0.1 133,217 + SMc04139 0.59 +0.8 133,218 - SMc04139 0.59 -0.9 133,277 + SMc04139 0.64 -0.8 133,596 - -3.6 134,017 + SMc04138 0.35 -1.6 134,017 + SMc04138 0.35 -0.4 134,018 - SMc04138 0.35 -0.5 134,160 + SMc04138 0.49 +0.2 134,311 - SMc04138 0.64 -1.1 134,536 - SMc04138 0.86 -1.6 134,628 + +0.2 134,628 + -0.3 134,629 - +0.9
Or see this region's nucleotide sequence