Experiment: Cisplatin 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc04137 and SMc04136 overlap by 8 nucleotides SMc04136 and SMc04135 are separated by 14 nucleotides SMc04135 and SMc04134 are separated by 194 nucleotides SMc04134 and SMc04133 are separated by 122 nucleotides
SMc04137: SMc04137 - ABC transporter permease, at 134,700 to 135,587
SMc04137
SMc04136: SMc04136 - ABC transporter permease, at 135,580 to 136,527
SMc04136
SMc04135: SMc04135 - periplasmic binding ABC transporter protein, at 136,542 to 137,825
SMc04135
SMc04134: SMc04134 - transcriptional regulator, at 138,020 to 138,697
SMc04134
SMc04133: SMc04133 - oxidoreductase, at 138,820 to 139,968
SMc04133
Position (kb) 136
137
138 Strain fitness (log2 ratio) -2
-1
0
1
2 at 135.590 kb on + strand at 135.590 kb on + strand at 135.591 kb on - strand at 135.716 kb on + strand, within SMc04136 at 135.725 kb on + strand, within SMc04136 at 135.864 kb on - strand, within SMc04136 at 135.908 kb on + strand, within SMc04136 at 135.908 kb on + strand, within SMc04136 at 135.908 kb on + strand, within SMc04136 at 135.909 kb on - strand, within SMc04136 at 136.004 kb on + strand, within SMc04136 at 136.004 kb on + strand, within SMc04136 at 136.005 kb on - strand, within SMc04136 at 136.139 kb on + strand, within SMc04136 at 136.139 kb on + strand, within SMc04136 at 136.139 kb on + strand, within SMc04136 at 136.241 kb on + strand, within SMc04136 at 136.241 kb on + strand, within SMc04136 at 136.242 kb on - strand, within SMc04136 at 136.302 kb on - strand, within SMc04136 at 136.302 kb on - strand, within SMc04136 at 136.361 kb on + strand, within SMc04136 at 136.361 kb on + strand, within SMc04136 at 136.362 kb on - strand, within SMc04136 at 136.362 kb on - strand, within SMc04136 at 136.362 kb on - strand, within SMc04136 at 136.454 kb on - strand at 136.544 kb on - strand at 136.721 kb on - strand, within SMc04135 at 136.721 kb on - strand, within SMc04135 at 136.852 kb on + strand, within SMc04135 at 137.068 kb on + strand, within SMc04135 at 137.068 kb on + strand, within SMc04135 at 137.068 kb on + strand, within SMc04135 at 137.120 kb on - strand, within SMc04135 at 137.260 kb on + strand, within SMc04135 at 137.260 kb on + strand, within SMc04135 at 137.261 kb on - strand, within SMc04135 at 137.528 kb on - strand, within SMc04135 at 137.528 kb on - strand, within SMc04135 at 137.540 kb on - strand, within SMc04135 at 137.540 kb on - strand, within SMc04135 at 137.796 kb on + strand at 137.942 kb on - strand at 138.156 kb on + strand, within SMc04134 at 138.222 kb on - strand, within SMc04134 at 138.269 kb on + strand, within SMc04134 at 138.269 kb on + strand, within SMc04134 at 138.472 kb on - strand, within SMc04134 at 138.548 kb on + strand, within SMc04134 at 138.572 kb on + strand, within SMc04134 at 138.594 kb on - strand, within SMc04134 at 138.761 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0005 mg/ml remove 135,590 + +0.1 135,590 + +1.5 135,591 - -0.7 135,716 + SMc04136 0.14 +1.4 135,725 + SMc04136 0.15 +0.7 135,864 - SMc04136 0.30 -1.4 135,908 + SMc04136 0.35 +1.3 135,908 + SMc04136 0.35 +0.1 135,908 + SMc04136 0.35 +0.2 135,909 - SMc04136 0.35 -1.0 136,004 + SMc04136 0.45 -0.1 136,004 + SMc04136 0.45 -0.7 136,005 - SMc04136 0.45 +0.1 136,139 + SMc04136 0.59 -0.7 136,139 + SMc04136 0.59 +1.6 136,139 + SMc04136 0.59 +2.3 136,241 + SMc04136 0.70 +0.1 136,241 + SMc04136 0.70 -0.2 136,242 - SMc04136 0.70 -0.4 136,302 - SMc04136 0.76 -1.0 136,302 - SMc04136 0.76 -2.7 136,361 + SMc04136 0.82 +1.4 136,361 + SMc04136 0.82 +0.4 136,362 - SMc04136 0.82 +0.1 136,362 - SMc04136 0.82 -0.9 136,362 - SMc04136 0.82 +0.3 136,454 - +0.4 136,544 - -1.5 136,721 - SMc04135 0.14 -0.0 136,721 - SMc04135 0.14 -1.4 136,852 + SMc04135 0.24 +1.0 137,068 + SMc04135 0.41 +0.3 137,068 + SMc04135 0.41 -1.0 137,068 + SMc04135 0.41 -0.6 137,120 - SMc04135 0.45 -0.2 137,260 + SMc04135 0.56 -0.1 137,260 + SMc04135 0.56 +0.7 137,261 - SMc04135 0.56 -1.6 137,528 - SMc04135 0.77 +0.1 137,528 - SMc04135 0.77 +0.4 137,540 - SMc04135 0.78 -1.4 137,540 - SMc04135 0.78 -0.6 137,796 + +1.1 137,942 - +1.6 138,156 + SMc04134 0.20 +0.2 138,222 - SMc04134 0.30 -1.5 138,269 + SMc04134 0.37 +0.4 138,269 + SMc04134 0.37 -1.1 138,472 - SMc04134 0.67 +0.3 138,548 + SMc04134 0.78 -0.3 138,572 + SMc04134 0.81 -2.2 138,594 - SMc04134 0.85 -1.7 138,761 + -0.4
Or see this region's nucleotide sequence