Experiment: Cisplatin 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc04128 and SMc04127 are separated by 718 nucleotides SMc04127 and SMc04126 overlap by 4 nucleotides
SMc04128: SMc04128 - heavy metal transporting ATPase, at 144,857 to 147,088
SMc04128
SMc04127: SMc04127 - ABC transporter ATP-binding protein, at 147,807 to 149,342
SMc04127
SMc04126: SMc04126 - ABC transporter permease, at 149,339 to 150,472
SMc04126
Position (kb)
147
148
149
150 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 147.136 kb on + strand at 147.137 kb on - strand at 147.137 kb on - strand at 147.143 kb on + strand at 147.143 kb on + strand at 147.144 kb on - strand at 147.144 kb on - strand at 147.144 kb on - strand at 147.145 kb on + strand at 147.145 kb on + strand at 147.145 kb on + strand at 147.145 kb on + strand at 147.145 kb on + strand at 147.145 kb on + strand at 147.145 kb on + strand at 147.146 kb on - strand at 147.146 kb on - strand at 147.146 kb on - strand at 147.146 kb on - strand at 147.146 kb on - strand at 147.146 kb on - strand at 147.146 kb on - strand at 147.146 kb on - strand at 147.146 kb on - strand at 147.146 kb on - strand at 147.146 kb on - strand at 147.146 kb on - strand at 147.149 kb on + strand at 147.149 kb on + strand at 147.149 kb on + strand at 147.150 kb on - strand at 147.150 kb on - strand at 147.308 kb on + strand at 147.341 kb on + strand at 147.387 kb on - strand at 147.387 kb on - strand at 147.458 kb on + strand at 147.579 kb on + strand at 147.580 kb on - strand at 147.580 kb on - strand at 147.638 kb on - strand at 147.639 kb on + strand at 147.669 kb on - strand at 147.676 kb on + strand at 147.678 kb on + strand at 147.723 kb on + strand at 147.724 kb on - strand at 147.729 kb on + strand at 147.731 kb on + strand at 147.732 kb on - strand at 147.732 kb on - strand at 147.807 kb on - strand at 147.807 kb on - strand at 147.815 kb on + strand at 147.815 kb on + strand at 147.816 kb on - strand at 147.838 kb on + strand at 147.884 kb on + strand at 147.884 kb on + strand at 147.960 kb on + strand at 147.969 kb on + strand, within SMc04127 at 147.969 kb on + strand, within SMc04127 at 148.191 kb on + strand, within SMc04127 at 148.192 kb on - strand, within SMc04127 at 148.192 kb on - strand, within SMc04127 at 148.192 kb on - strand, within SMc04127 at 148.403 kb on + strand, within SMc04127 at 148.403 kb on + strand, within SMc04127 at 148.897 kb on - strand, within SMc04127 at 148.980 kb on + strand, within SMc04127 at 148.980 kb on + strand, within SMc04127 at 148.980 kb on + strand, within SMc04127 at 148.985 kb on + strand, within SMc04127 at 148.985 kb on + strand, within SMc04127 at 149.113 kb on + strand, within SMc04127 at 149.114 kb on - strand, within SMc04127 at 149.114 kb on - strand, within SMc04127 at 149.345 kb on - strand at 149.352 kb on - strand at 149.352 kb on - strand at 149.378 kb on + strand at 149.379 kb on - strand at 149.472 kb on - strand, within SMc04126 at 149.472 kb on - strand, within SMc04126 at 149.509 kb on + strand, within SMc04126 at 149.509 kb on + strand, within SMc04126 at 149.510 kb on - strand, within SMc04126 at 149.615 kb on + strand, within SMc04126 at 149.616 kb on + strand, within SMc04126 at 149.616 kb on - strand, within SMc04126 at 149.675 kb on + strand, within SMc04126 at 149.675 kb on + strand, within SMc04126 at 149.676 kb on - strand, within SMc04126 at 149.770 kb on + strand, within SMc04126 at 149.770 kb on + strand, within SMc04126 at 149.771 kb on - strand, within SMc04126 at 149.804 kb on - strand, within SMc04126 at 149.822 kb on + strand, within SMc04126 at 149.823 kb on - strand, within SMc04126 at 149.823 kb on - strand, within SMc04126 at 149.823 kb on - strand, within SMc04126 at 150.117 kb on + strand, within SMc04126
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0005 mg/ml remove 147,136 + -1.2 147,137 - +0.0 147,137 - +0.4 147,143 + +2.0 147,143 + +0.4 147,144 - +0.1 147,144 - +0.2 147,144 - -0.6 147,145 + -1.9 147,145 + -0.1 147,145 + -0.3 147,145 + -0.5 147,145 + -1.0 147,145 + -1.9 147,145 + -0.6 147,146 - -0.2 147,146 - +1.1 147,146 - +1.4 147,146 - -0.2 147,146 - -0.6 147,146 - +0.1 147,146 - +0.2 147,146 - +0.1 147,146 - -0.2 147,146 - +0.7 147,146 - -0.2 147,146 - +0.8 147,149 + +0.6 147,149 + +0.3 147,149 + -1.0 147,150 - +0.4 147,150 - +0.1 147,308 + -1.7 147,341 + +0.6 147,387 - -2.9 147,387 - -0.0 147,458 + +1.1 147,579 + +0.5 147,580 - -0.4 147,580 - +0.4 147,638 - -0.4 147,639 + +0.4 147,669 - -0.7 147,676 + -0.2 147,678 + -0.6 147,723 + +0.3 147,724 - -0.2 147,729 + +3.6 147,731 + +1.1 147,732 - -0.2 147,732 - -0.2 147,807 - -0.6 147,807 - +1.4 147,815 + +2.4 147,815 + +0.2 147,816 - -0.0 147,838 + -0.7 147,884 + +2.4 147,884 + -0.6 147,960 + -0.4 147,969 + SMc04127 0.11 -0.1 147,969 + SMc04127 0.11 -0.6 148,191 + SMc04127 0.25 -1.9 148,192 - SMc04127 0.25 +0.4 148,192 - SMc04127 0.25 +0.1 148,192 - SMc04127 0.25 +1.4 148,403 + SMc04127 0.39 -1.6 148,403 + SMc04127 0.39 -2.7 148,897 - SMc04127 0.71 -0.1 148,980 + SMc04127 0.76 -1.2 148,980 + SMc04127 0.76 +0.4 148,980 + SMc04127 0.76 -1.2 148,985 + SMc04127 0.77 +0.6 148,985 + SMc04127 0.77 -3.2 149,113 + SMc04127 0.85 -2.9 149,114 - SMc04127 0.85 +1.4 149,114 - SMc04127 0.85 -0.9 149,345 - +0.7 149,352 - -0.5 149,352 - -1.6 149,378 + -0.2 149,379 - +1.1 149,472 - SMc04126 0.12 -0.6 149,472 - SMc04126 0.12 -0.4 149,509 + SMc04126 0.15 +1.9 149,509 + SMc04126 0.15 +0.8 149,510 - SMc04126 0.15 -0.3 149,615 + SMc04126 0.24 +0.1 149,616 + SMc04126 0.24 -1.9 149,616 - SMc04126 0.24 -1.0 149,675 + SMc04126 0.30 -0.7 149,675 + SMc04126 0.30 -1.3 149,676 - SMc04126 0.30 -1.0 149,770 + SMc04126 0.38 +1.4 149,770 + SMc04126 0.38 -0.7 149,771 - SMc04126 0.38 +0.4 149,804 - SMc04126 0.41 +0.4 149,822 + SMc04126 0.43 -0.0 149,823 - SMc04126 0.43 -1.7 149,823 - SMc04126 0.43 +0.8 149,823 - SMc04126 0.43 -0.9 150,117 + SMc04126 0.69 +0.5
Or see this region's nucleotide sequence