Strain Fitness in Sinorhizobium meliloti 1021 around SMc03896
Experiment: Cisplatin 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.0005 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,565,723 | - | +0.5 | |||
3,565,723 | - | +0.0 | |||
3,565,777 | + | +1.8 | |||
3,565,777 | + | -0.4 | |||
3,565,778 | - | +0.3 | |||
3,565,832 | - | +1.6 | |||
3,565,868 | + | -0.1 | |||
3,565,868 | + | +1.3 | |||
3,565,868 | + | +1.3 | |||
3,565,884 | + | -0.2 | |||
3,565,899 | - | -1.2 | |||
3,565,994 | - | -2.2 | |||
3,565,994 | - | -3.4 | |||
3,566,035 | - | -0.1 | |||
3,566,035 | - | +0.3 | |||
3,566,037 | + | +3.1 | |||
3,566,209 | - | -1.6 | |||
3,566,265 | + | -3.0 | |||
3,566,266 | - | -0.5 | |||
3,566,456 | - | SMc03896 | 0.15 | -1.1 | |
3,566,456 | - | SMc03896 | 0.15 | -0.3 | |
3,566,456 | - | SMc03896 | 0.15 | -0.7 | |
3,566,741 | + | SMc03896 | 0.67 | -1.0 | |
3,566,741 | + | SMc03896 | 0.67 | -0.7 | |
3,566,742 | - | SMc03896 | 0.67 | +0.1 | |
3,566,742 | - | SMc03896 | 0.67 | +0.0 | |
3,566,742 | - | SMc03896 | 0.67 | -0.3 | |
3,566,743 | + | SMc03896 | 0.67 | -0.8 | |
3,566,744 | - | SMc03896 | 0.67 | +1.7 | |
3,566,744 | - | SMc03896 | 0.67 | -2.1 | |
3,566,896 | + | -0.2 | |||
3,566,897 | - | -1.1 |
Or see this region's nucleotide sequence