Strain Fitness in Sinorhizobium meliloti 1021 around SMc03889
Experiment: Cisplatin 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.0005 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,556,589 | - | SMc03889 | 0.13 | +1.9 | |
3,556,640 | + | SMc03889 | 0.18 | +0.7 | |
3,557,179 | + | SMc03889 | 0.65 | +0.0 | |
3,557,180 | - | SMc03889 | 0.65 | -0.4 | |
3,557,580 | - | -2.0 | |||
3,557,580 | - | +0.3 | |||
3,557,580 | - | +0.8 | |||
3,557,580 | - | -0.7 | |||
3,557,581 | + | +0.8 | |||
3,557,581 | + | +0.7 | |||
3,557,706 | + | +0.1 | |||
3,557,820 | + | SMc03890 | 0.16 | -0.3 | |
3,557,903 | + | SMc03890 | 0.26 | +0.9 | |
3,558,109 | - | SMc03890 | 0.52 | +1.0 | |
3,558,205 | + | SMc03890 | 0.65 | -2.2 | |
3,558,205 | + | SMc03890 | 0.65 | -0.0 | |
3,558,526 | - | -2.7 |
Or see this region's nucleotide sequence