Experiment: Cisplatin 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc03022 and SMc03023 are separated by 198 nucleotides SMc03023 and SMc03024 are separated by 1 nucleotides SMc03024 and SMc03025 are separated by 45 nucleotides
SMc03022: SMc03022 - flagellar motor protein MotA, at 720,050 to 720,928
SMc03022
SMc03023: SMc03023 - hypothetical protein, at 721,127 to 721,906
SMc03023
SMc03024: SMc03024 - flagellar basal body rod protein FlgF, at 721,908 to 722,633
SMc03024
SMc03025: SMc03025 - flagellum-specific ATP synthase, at 722,679 to 724,082
SMc03025
Position (kb) 721
722
723 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 720.934 kb on + strand at 720.968 kb on + strand at 720.968 kb on + strand at 721.140 kb on - strand at 721.140 kb on - strand at 721.140 kb on - strand at 721.140 kb on - strand at 721.140 kb on - strand at 721.142 kb on - strand at 721.226 kb on + strand, within SMc03023 at 721.226 kb on + strand, within SMc03023 at 721.226 kb on + strand, within SMc03023 at 721.226 kb on + strand, within SMc03023 at 721.227 kb on - strand, within SMc03023 at 721.227 kb on - strand, within SMc03023 at 721.227 kb on - strand, within SMc03023 at 721.230 kb on - strand, within SMc03023 at 721.230 kb on - strand, within SMc03023 at 721.290 kb on - strand, within SMc03023 at 721.295 kb on + strand, within SMc03023 at 721.296 kb on - strand, within SMc03023 at 721.296 kb on - strand, within SMc03023 at 721.332 kb on - strand, within SMc03023 at 721.332 kb on - strand, within SMc03023 at 721.415 kb on + strand, within SMc03023 at 721.508 kb on - strand, within SMc03023 at 721.568 kb on + strand, within SMc03023 at 721.569 kb on - strand, within SMc03023 at 721.604 kb on + strand, within SMc03023 at 721.706 kb on + strand, within SMc03023 at 721.707 kb on - strand, within SMc03023 at 721.923 kb on + strand at 721.923 kb on + strand at 721.924 kb on - strand at 721.982 kb on + strand, within SMc03024 at 722.070 kb on + strand, within SMc03024 at 722.071 kb on - strand, within SMc03024 at 722.071 kb on - strand, within SMc03024 at 722.071 kb on - strand, within SMc03024 at 722.243 kb on - strand, within SMc03024 at 722.377 kb on - strand, within SMc03024 at 722.377 kb on - strand, within SMc03024 at 722.377 kb on - strand, within SMc03024 at 722.410 kb on - strand, within SMc03024 at 722.515 kb on + strand, within SMc03024 at 722.516 kb on - strand, within SMc03024 at 722.516 kb on - strand, within SMc03024 at 722.573 kb on + strand at 722.573 kb on + strand at 722.574 kb on - strand at 722.574 kb on - strand at 722.751 kb on + strand at 722.814 kb on + strand at 722.814 kb on + strand at 722.815 kb on - strand at 722.815 kb on - strand at 722.815 kb on - strand at 722.815 kb on - strand at 723.169 kb on + strand, within SMc03025
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0005 mg/ml remove 720,934 + -0.3 720,968 + -1.3 720,968 + -0.9 721,140 - -1.5 721,140 - -0.2 721,140 - +0.8 721,140 - +0.9 721,140 - -0.8 721,142 - +0.9 721,226 + SMc03023 0.13 -0.5 721,226 + SMc03023 0.13 +1.3 721,226 + SMc03023 0.13 -2.9 721,226 + SMc03023 0.13 -1.7 721,227 - SMc03023 0.13 -0.3 721,227 - SMc03023 0.13 -0.6 721,227 - SMc03023 0.13 -1.3 721,230 - SMc03023 0.13 -2.6 721,230 - SMc03023 0.13 +0.3 721,290 - SMc03023 0.21 +1.1 721,295 + SMc03023 0.22 -1.3 721,296 - SMc03023 0.22 -0.9 721,296 - SMc03023 0.22 +2.7 721,332 - SMc03023 0.26 +0.2 721,332 - SMc03023 0.26 +2.2 721,415 + SMc03023 0.37 +0.4 721,508 - SMc03023 0.49 +0.9 721,568 + SMc03023 0.57 +0.4 721,569 - SMc03023 0.57 -1.7 721,604 + SMc03023 0.61 +0.5 721,706 + SMc03023 0.74 +1.3 721,707 - SMc03023 0.74 -0.6 721,923 + -3.0 721,923 + -0.7 721,924 - -0.3 721,982 + SMc03024 0.10 -1.4 722,070 + SMc03024 0.22 -0.9 722,071 - SMc03024 0.22 -0.2 722,071 - SMc03024 0.22 +0.9 722,071 - SMc03024 0.22 -1.1 722,243 - SMc03024 0.46 -0.0 722,377 - SMc03024 0.65 -1.2 722,377 - SMc03024 0.65 -1.1 722,377 - SMc03024 0.65 -0.3 722,410 - SMc03024 0.69 -1.4 722,515 + SMc03024 0.84 -1.4 722,516 - SMc03024 0.84 +0.1 722,516 - SMc03024 0.84 -0.7 722,573 + +0.2 722,573 + -3.0 722,574 - +0.8 722,574 - -2.0 722,751 + +1.6 722,814 + -1.3 722,814 + +1.3 722,815 - -0.1 722,815 - -1.8 722,815 - -0.6 722,815 - -0.5 723,169 + SMc03025 0.35 +0.1
Or see this region's nucleotide sequence