Experiment: Cisplatin 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc03020 and SMc03021 are separated by 19 nucleotides SMc03021 and SMc03022 are separated by 1 nucleotides SMc03022 and SMc03023 are separated by 198 nucleotides SMc03023 and SMc03024 are separated by 1 nucleotides
SMc03020: SMc03020 - flagellar motor switch protein, at 718,449 to 719,081
SMc03020
SMc03021: SMc03021 - flagellar motor switch transmembrane protein, at 719,101 to 720,048
SMc03021
SMc03022: SMc03022 - flagellar motor protein MotA, at 720,050 to 720,928
SMc03022
SMc03023: SMc03023 - hypothetical protein, at 721,127 to 721,906
SMc03023
SMc03024: SMc03024 - flagellar basal body rod protein FlgF, at 721,908 to 722,633
SMc03024
Position (kb) 720
721 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 719.165 kb on + strand at 719.166 kb on - strand at 719.198 kb on + strand, within SMc03021 at 719.199 kb on - strand, within SMc03021 at 719.199 kb on - strand, within SMc03021 at 719.639 kb on - strand, within SMc03021 at 719.695 kb on + strand, within SMc03021 at 719.695 kb on + strand, within SMc03021 at 719.695 kb on + strand, within SMc03021 at 719.695 kb on + strand, within SMc03021 at 719.695 kb on + strand, within SMc03021 at 719.695 kb on + strand, within SMc03021 at 719.696 kb on - strand, within SMc03021 at 719.867 kb on + strand, within SMc03021 at 720.186 kb on + strand, within SMc03022 at 720.186 kb on + strand, within SMc03022 at 720.187 kb on - strand, within SMc03022 at 720.216 kb on + strand, within SMc03022 at 720.216 kb on + strand, within SMc03022 at 720.216 kb on + strand at 720.216 kb on + strand, within SMc03022 at 720.444 kb on + strand, within SMc03022 at 720.444 kb on + strand, within SMc03022 at 720.445 kb on - strand, within SMc03022 at 720.543 kb on + strand, within SMc03022 at 720.544 kb on - strand, within SMc03022 at 720.544 kb on - strand, within SMc03022 at 720.681 kb on + strand, within SMc03022 at 720.682 kb on - strand, within SMc03022 at 720.876 kb on + strand at 720.876 kb on + strand at 720.877 kb on - strand at 720.889 kb on + strand at 720.934 kb on + strand at 720.968 kb on + strand at 720.968 kb on + strand at 721.140 kb on - strand at 721.140 kb on - strand at 721.140 kb on - strand at 721.140 kb on - strand at 721.140 kb on - strand at 721.142 kb on - strand at 721.226 kb on + strand, within SMc03023 at 721.226 kb on + strand, within SMc03023 at 721.226 kb on + strand, within SMc03023 at 721.226 kb on + strand, within SMc03023 at 721.227 kb on - strand, within SMc03023 at 721.227 kb on - strand, within SMc03023 at 721.227 kb on - strand, within SMc03023 at 721.230 kb on - strand, within SMc03023 at 721.230 kb on - strand, within SMc03023 at 721.290 kb on - strand, within SMc03023 at 721.295 kb on + strand, within SMc03023 at 721.296 kb on - strand, within SMc03023 at 721.296 kb on - strand, within SMc03023 at 721.332 kb on - strand, within SMc03023 at 721.332 kb on - strand, within SMc03023 at 721.415 kb on + strand, within SMc03023 at 721.508 kb on - strand, within SMc03023 at 721.568 kb on + strand, within SMc03023 at 721.569 kb on - strand, within SMc03023 at 721.604 kb on + strand, within SMc03023 at 721.706 kb on + strand, within SMc03023 at 721.707 kb on - strand, within SMc03023 at 721.923 kb on + strand at 721.923 kb on + strand at 721.924 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0005 mg/ml remove 719,165 + +0.1 719,166 - -1.3 719,198 + SMc03021 0.10 +0.0 719,199 - SMc03021 0.10 -1.0 719,199 - SMc03021 0.10 -3.0 719,639 - SMc03021 0.57 -0.1 719,695 + SMc03021 0.63 -0.3 719,695 + SMc03021 0.63 +3.6 719,695 + SMc03021 0.63 +1.8 719,695 + SMc03021 0.63 -1.2 719,695 + SMc03021 0.63 +0.1 719,695 + SMc03021 0.63 +2.0 719,696 - SMc03021 0.63 -1.1 719,867 + SMc03021 0.81 -0.6 720,186 + SMc03022 0.15 -0.4 720,186 + SMc03022 0.15 -2.9 720,187 - SMc03022 0.16 -0.0 720,216 + SMc03022 0.19 +1.8 720,216 + SMc03022 0.19 -0.8 720,216 + +0.6 720,216 + SMc03022 0.19 +0.3 720,444 + SMc03022 0.45 -0.1 720,444 + SMc03022 0.45 -0.7 720,445 - SMc03022 0.45 -0.4 720,543 + SMc03022 0.56 -0.7 720,544 - SMc03022 0.56 +0.4 720,544 - SMc03022 0.56 -1.1 720,681 + SMc03022 0.72 -1.2 720,682 - SMc03022 0.72 -0.2 720,876 + +0.8 720,876 + +0.3 720,877 - -1.3 720,889 + +0.2 720,934 + -0.3 720,968 + -1.3 720,968 + -0.9 721,140 - -1.5 721,140 - -0.2 721,140 - +0.8 721,140 - +0.9 721,140 - -0.8 721,142 - +0.9 721,226 + SMc03023 0.13 -0.5 721,226 + SMc03023 0.13 +1.3 721,226 + SMc03023 0.13 -2.9 721,226 + SMc03023 0.13 -1.7 721,227 - SMc03023 0.13 -0.3 721,227 - SMc03023 0.13 -0.6 721,227 - SMc03023 0.13 -1.3 721,230 - SMc03023 0.13 -2.6 721,230 - SMc03023 0.13 +0.3 721,290 - SMc03023 0.21 +1.1 721,295 + SMc03023 0.22 -1.3 721,296 - SMc03023 0.22 -0.9 721,296 - SMc03023 0.22 +2.7 721,332 - SMc03023 0.26 +0.2 721,332 - SMc03023 0.26 +2.2 721,415 + SMc03023 0.37 +0.4 721,508 - SMc03023 0.49 +0.9 721,568 + SMc03023 0.57 +0.4 721,569 - SMc03023 0.57 -1.7 721,604 + SMc03023 0.61 +0.5 721,706 + SMc03023 0.74 +1.3 721,707 - SMc03023 0.74 -0.6 721,923 + -3.0 721,923 + -0.7 721,924 - -0.3
Or see this region's nucleotide sequence