Experiment: Cisplatin 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc00940 and SMc00941 are separated by 491 nucleotides SMc00941 and SMc00942 are separated by 88 nucleotides SMc00942 and SMc00943 are separated by 354 nucleotides
SMc00940: SMc00940 - hypothetical protein, at 1,768,591 to 1,768,842
SMc00940
SMc00941: SMc00941 - hypothetical protein, at 1,769,334 to 1,769,552
SMc00941
SMc00942: SMc00942 - hypothetical protein, at 1,769,641 to 1,769,883
SMc00942
SMc00943: SMc00943 - TrpR binding protein WrbA, at 1,770,238 to 1,770,837
SMc00943
Position (kb)
1769
1770 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1768.826 kb on + strand at 1768.827 kb on - strand at 1768.827 kb on - strand at 1769.002 kb on + strand at 1769.002 kb on + strand at 1769.002 kb on + strand at 1769.036 kb on + strand at 1769.036 kb on + strand at 1769.079 kb on + strand at 1769.080 kb on - strand at 1769.080 kb on - strand at 1769.202 kb on - strand at 1769.341 kb on + strand at 1769.341 kb on + strand at 1769.341 kb on + strand at 1769.344 kb on + strand at 1769.344 kb on + strand at 1769.345 kb on - strand at 1769.345 kb on - strand at 1769.528 kb on + strand, within SMc00941 at 1769.545 kb on + strand at 1769.545 kb on + strand at 1769.545 kb on + strand at 1769.545 kb on + strand at 1769.545 kb on + strand at 1769.545 kb on + strand at 1769.545 kb on + strand at 1769.545 kb on + strand at 1769.545 kb on + strand at 1769.546 kb on - strand at 1769.546 kb on - strand at 1769.593 kb on + strand at 1769.594 kb on - strand at 1769.654 kb on - strand at 1769.817 kb on - strand, within SMc00942 at 1769.898 kb on + strand at 1769.949 kb on + strand at 1769.949 kb on + strand at 1769.949 kb on + strand at 1769.949 kb on + strand at 1769.950 kb on - strand at 1770.026 kb on - strand at 1770.092 kb on + strand at 1770.142 kb on + strand at 1770.356 kb on + strand, within SMc00943 at 1770.408 kb on - strand, within SMc00943 at 1770.567 kb on + strand, within SMc00943 at 1770.573 kb on + strand, within SMc00943 at 1770.632 kb on + strand, within SMc00943 at 1770.633 kb on - strand, within SMc00943 at 1770.795 kb on + strand at 1770.815 kb on + strand at 1770.815 kb on + strand at 1770.816 kb on - strand at 1770.816 kb on - strand at 1770.827 kb on - strand at 1770.827 kb on - strand at 1770.843 kb on + strand at 1770.844 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0005 mg/ml remove 1,768,826 + -1.5 1,768,827 - +1.9 1,768,827 - +0.8 1,769,002 + -0.3 1,769,002 + -1.7 1,769,002 + +0.8 1,769,036 + -0.5 1,769,036 + +0.1 1,769,079 + +0.8 1,769,080 - +0.2 1,769,080 - +1.1 1,769,202 - -0.1 1,769,341 + +0.3 1,769,341 + +1.3 1,769,341 + -0.8 1,769,344 + -0.2 1,769,344 + -0.6 1,769,345 - -0.4 1,769,345 - -0.0 1,769,528 + SMc00941 0.89 +0.4 1,769,545 + +1.0 1,769,545 + -0.2 1,769,545 + +0.2 1,769,545 + -0.8 1,769,545 + +0.2 1,769,545 + +1.0 1,769,545 + -0.2 1,769,545 + +0.5 1,769,545 + -0.1 1,769,546 - -2.0 1,769,546 - -2.6 1,769,593 + +0.1 1,769,594 - -3.0 1,769,654 - -0.0 1,769,817 - SMc00942 0.72 +1.1 1,769,898 + -0.2 1,769,949 + +2.0 1,769,949 + +1.1 1,769,949 + -0.2 1,769,949 + +0.2 1,769,950 - +0.7 1,770,026 - -3.1 1,770,092 + +0.8 1,770,142 + -0.1 1,770,356 + SMc00943 0.20 +0.4 1,770,408 - SMc00943 0.28 +1.3 1,770,567 + SMc00943 0.55 -0.2 1,770,573 + SMc00943 0.56 -2.0 1,770,632 + SMc00943 0.66 -0.5 1,770,633 - SMc00943 0.66 -0.1 1,770,795 + -0.2 1,770,815 + -0.4 1,770,815 + +0.2 1,770,816 - -1.3 1,770,816 - -0.2 1,770,827 - -0.1 1,770,827 - +1.2 1,770,843 + -0.8 1,770,844 - -0.4
Or see this region's nucleotide sequence