Experiment: Cisplatin 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc00822 and SMc00823 overlap by 1 nucleotides SMc00823 and SMc00824 are separated by 60 nucleotides SMc00824 and SMc00825 are separated by 136 nucleotides
SMc00822: SMc00822 - hypothetical protein, at 843,615 to 843,911
SMc00822
SMc00823: SMc00823 - hypothetical protein, at 843,911 to 844,306
SMc00823
SMc00824: SMc00824 - hypothetical protein, at 844,367 to 845,200
SMc00824
SMc00825: SMc00825 - glutamate--cysteine ligase precursor protein, at 845,337 to 846,710
SMc00825
Position (kb)
844
845
846 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 843.465 kb on - strand at 843.465 kb on - strand at 843.465 kb on - strand at 843.474 kb on + strand at 843.475 kb on - strand at 843.475 kb on - strand at 843.475 kb on - strand at 843.495 kb on + strand at 843.511 kb on + strand at 843.511 kb on + strand at 843.511 kb on + strand at 843.511 kb on + strand at 843.512 kb on - strand at 843.546 kb on - strand at 843.574 kb on + strand at 843.574 kb on + strand at 843.574 kb on + strand at 843.574 kb on + strand at 843.575 kb on - strand at 843.575 kb on - strand at 843.575 kb on - strand at 843.575 kb on - strand at 843.575 kb on - strand at 843.577 kb on + strand at 843.796 kb on + strand, within SMc00822 at 843.796 kb on + strand, within SMc00822 at 843.796 kb on + strand, within SMc00822 at 843.797 kb on - strand, within SMc00822 at 843.806 kb on + strand, within SMc00822 at 843.806 kb on + strand, within SMc00822 at 843.806 kb on + strand, within SMc00822 at 843.811 kb on - strand, within SMc00822 at 843.909 kb on + strand at 843.931 kb on - strand at 843.931 kb on - strand at 843.931 kb on - strand at 844.129 kb on + strand, within SMc00823 at 844.214 kb on - strand, within SMc00823 at 844.271 kb on + strand at 844.272 kb on - strand at 844.299 kb on - strand at 844.304 kb on + strand at 844.323 kb on + strand at 844.368 kb on + strand at 844.845 kb on + strand, within SMc00824 at 844.845 kb on + strand, within SMc00824 at 844.989 kb on + strand, within SMc00824 at 844.998 kb on + strand, within SMc00824 at 844.998 kb on + strand, within SMc00824 at 844.998 kb on + strand, within SMc00824 at 845.053 kb on + strand, within SMc00824 at 845.053 kb on + strand, within SMc00824 at 845.053 kb on + strand, within SMc00824 at 845.054 kb on - strand, within SMc00824 at 845.238 kb on + strand at 845.239 kb on - strand at 845.239 kb on - strand at 845.239 kb on - strand at 845.341 kb on + strand at 845.342 kb on - strand at 845.348 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0005 mg/ml remove 843,465 - +0.5 843,465 - +0.9 843,465 - +0.4 843,474 + -0.6 843,475 - +1.8 843,475 - +0.0 843,475 - -0.5 843,495 + +0.3 843,511 + -2.1 843,511 + -1.0 843,511 + -1.5 843,511 + -0.1 843,512 - -0.7 843,546 - -0.5 843,574 + +0.8 843,574 + -1.0 843,574 + -1.3 843,574 + -0.1 843,575 - -1.6 843,575 - -0.8 843,575 - +0.4 843,575 - -0.2 843,575 - -0.3 843,577 + +0.7 843,796 + SMc00822 0.61 +0.3 843,796 + SMc00822 0.61 +0.4 843,796 + SMc00822 0.61 -1.5 843,797 - SMc00822 0.61 -3.3 843,806 + SMc00822 0.64 -1.9 843,806 + SMc00822 0.64 +1.0 843,806 + SMc00822 0.64 +0.9 843,811 - SMc00822 0.66 +1.4 843,909 + +0.5 843,931 - -2.0 843,931 - -0.9 843,931 - +0.0 844,129 + SMc00823 0.55 -1.7 844,214 - SMc00823 0.77 -0.9 844,271 + +0.1 844,272 - -1.3 844,299 - -2.9 844,304 + -0.1 844,323 + +0.5 844,368 + +0.3 844,845 + SMc00824 0.57 +0.8 844,845 + SMc00824 0.57 -0.1 844,989 + SMc00824 0.75 -0.2 844,998 + SMc00824 0.76 -2.3 844,998 + SMc00824 0.76 -2.3 844,998 + SMc00824 0.76 -0.3 845,053 + SMc00824 0.82 +0.3 845,053 + SMc00824 0.82 +0.0 845,053 + SMc00824 0.82 -0.4 845,054 - SMc00824 0.82 +0.1 845,238 + +0.7 845,239 - -1.0 845,239 - -0.7 845,239 - -0.4 845,341 + +1.3 845,342 - +0.1 845,348 - -0.2
Or see this region's nucleotide sequence