Experiment: Cisplatin 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc00366 and SMc00367 are separated by 321 nucleotides SMc00367 and SMc00368 are separated by 165 nucleotides SMc00368 and SMc00369 are separated by 17 nucleotides
SMc00366: SMc00366 - phenylalanyl-tRNA synthetase subunit beta, at 320,410 to 322,836
SMc00366
SMc00367: SMc00367 - hypothetical protein, at 323,158 to 323,517
SMc00367
SMc00368: SMc00368 - oxidoreductase, at 323,683 to 324,441
SMc00368
SMc00369: SMc00369 - oxidoreductase, at 324,459 to 324,662
SMc00369
Position (kb) 323
324 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 322.952 kb on - strand at 323.225 kb on + strand, within SMc00367 at 323.225 kb on + strand, within SMc00367 at 323.226 kb on - strand, within SMc00367 at 323.226 kb on - strand, within SMc00367 at 323.234 kb on + strand, within SMc00367 at 323.477 kb on + strand, within SMc00367 at 323.477 kb on + strand, within SMc00367 at 323.478 kb on - strand, within SMc00367 at 323.478 kb on - strand, within SMc00367 at 323.478 kb on - strand, within SMc00367 at 323.478 kb on - strand, within SMc00367 at 323.478 kb on - strand, within SMc00367 at 323.607 kb on + strand at 323.607 kb on + strand at 323.611 kb on + strand at 323.611 kb on + strand at 323.612 kb on - strand at 323.612 kb on - strand at 323.612 kb on - strand at 323.829 kb on + strand, within SMc00368 at 323.886 kb on + strand, within SMc00368 at 324.125 kb on + strand, within SMc00368 at 324.291 kb on - strand, within SMc00368 at 324.291 kb on - strand, within SMc00368 at 324.293 kb on + strand, within SMc00368 at 324.293 kb on + strand, within SMc00368 at 324.293 kb on + strand, within SMc00368 at 324.293 kb on + strand, within SMc00368 at 324.294 kb on - strand, within SMc00368 at 324.294 kb on - strand, within SMc00368 at 324.294 kb on - strand, within SMc00368 at 324.513 kb on - strand, within SMc00369
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0005 mg/ml remove 322,952 - -0.8 323,225 + SMc00367 0.19 -0.0 323,225 + SMc00367 0.19 -3.0 323,226 - SMc00367 0.19 +1.7 323,226 - SMc00367 0.19 +0.7 323,234 + SMc00367 0.21 -1.4 323,477 + SMc00367 0.89 -0.3 323,477 + SMc00367 0.89 -2.7 323,478 - SMc00367 0.89 +0.1 323,478 - SMc00367 0.89 +0.3 323,478 - SMc00367 0.89 -1.6 323,478 - SMc00367 0.89 -1.5 323,478 - SMc00367 0.89 -0.5 323,607 + -0.4 323,607 + +0.7 323,611 + -0.6 323,611 + -0.2 323,612 - -4.1 323,612 - -0.6 323,612 - -1.0 323,829 + SMc00368 0.19 -0.0 323,886 + SMc00368 0.27 -2.4 324,125 + SMc00368 0.58 -2.0 324,291 - SMc00368 0.80 +0.1 324,291 - SMc00368 0.80 +0.7 324,293 + SMc00368 0.80 +0.4 324,293 + SMc00368 0.80 -1.7 324,293 + SMc00368 0.80 +0.2 324,293 + SMc00368 0.80 +0.5 324,294 - SMc00368 0.81 +0.4 324,294 - SMc00368 0.81 -0.9 324,294 - SMc00368 0.81 -3.8 324,513 - SMc00369 0.26 -1.1
Or see this region's nucleotide sequence