Experiment: Cisplatin 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa1894 and SMa1896 are separated by 0 nucleotides SMa1896 and SMa1898 are separated by 205 nucleotides SMa1898 and SMa1900 are separated by 345 nucleotides
SMa1894: SMa1894 - methionine sulfoxide reductase B, at 1,076,880 to 1,077,323
SMa1894
SMa1896: SMa1896 - methionine sulfoxide reductase A, at 1,077,324 to 1,077,830
SMa1896
SMa1898: SMa1898 - hypothetical protein, at 1,078,036 to 1,079,262
SMa1898
SMa1900: SMa1900 - hypothetical protein, at 1,079,608 to 1,080,165
SMa1900
Position (kb)
1078
1079
1080 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1077.228 kb on + strand, within SMa1894 at 1077.228 kb on + strand, within SMa1894 at 1077.288 kb on + strand at 1077.417 kb on + strand, within SMa1896 at 1077.447 kb on + strand, within SMa1896 at 1077.591 kb on + strand, within SMa1896 at 1077.591 kb on + strand, within SMa1896 at 1077.606 kb on + strand, within SMa1896 at 1077.606 kb on + strand, within SMa1896 at 1077.606 kb on + strand, within SMa1896 at 1077.606 kb on + strand, within SMa1896 at 1077.607 kb on - strand, within SMa1896 at 1077.748 kb on - strand, within SMa1896 at 1077.748 kb on - strand, within SMa1896 at 1077.772 kb on - strand, within SMa1896 at 1077.805 kb on + strand at 1077.853 kb on + strand at 1077.854 kb on - strand at 1077.943 kb on + strand at 1077.943 kb on + strand at 1078.003 kb on + strand at 1078.008 kb on + strand at 1078.009 kb on - strand at 1078.047 kb on + strand at 1078.319 kb on - strand, within SMa1898 at 1078.333 kb on + strand, within SMa1898 at 1078.421 kb on + strand, within SMa1898 at 1078.539 kb on + strand, within SMa1898 at 1078.641 kb on + strand, within SMa1898 at 1078.789 kb on + strand, within SMa1898 at 1078.790 kb on - strand, within SMa1898 at 1078.922 kb on + strand, within SMa1898 at 1079.005 kb on + strand, within SMa1898 at 1079.006 kb on - strand, within SMa1898 at 1079.073 kb on + strand, within SMa1898 at 1079.074 kb on - strand, within SMa1898 at 1079.244 kb on - strand at 1079.285 kb on + strand at 1079.662 kb on - strand at 1079.682 kb on - strand, within SMa1900 at 1079.846 kb on + strand, within SMa1900 at 1079.846 kb on + strand, within SMa1900 at 1079.846 kb on + strand, within SMa1900 at 1079.846 kb on + strand, within SMa1900 at 1079.847 kb on - strand, within SMa1900 at 1079.937 kb on + strand, within SMa1900 at 1079.938 kb on - strand, within SMa1900 at 1079.982 kb on + strand, within SMa1900 at 1080.029 kb on - strand, within SMa1900 at 1080.239 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0005 mg/ml remove 1,077,228 + SMa1894 0.78 +1.4 1,077,228 + SMa1894 0.78 -2.1 1,077,288 + -0.8 1,077,417 + SMa1896 0.18 -2.6 1,077,447 + SMa1896 0.24 +1.2 1,077,591 + SMa1896 0.53 -3.2 1,077,591 + SMa1896 0.53 -0.1 1,077,606 + SMa1896 0.56 +0.3 1,077,606 + SMa1896 0.56 -0.5 1,077,606 + SMa1896 0.56 +0.4 1,077,606 + SMa1896 0.56 -0.6 1,077,607 - SMa1896 0.56 +0.3 1,077,748 - SMa1896 0.84 -1.4 1,077,748 - SMa1896 0.84 +0.4 1,077,772 - SMa1896 0.88 -0.2 1,077,805 + +1.0 1,077,853 + +0.5 1,077,854 - +0.3 1,077,943 + +0.3 1,077,943 + -1.1 1,078,003 + -0.2 1,078,008 + -1.8 1,078,009 - -0.2 1,078,047 + -1.1 1,078,319 - SMa1898 0.23 -1.1 1,078,333 + SMa1898 0.24 -1.0 1,078,421 + SMa1898 0.31 +0.4 1,078,539 + SMa1898 0.41 -1.5 1,078,641 + SMa1898 0.49 +0.7 1,078,789 + SMa1898 0.61 +1.6 1,078,790 - SMa1898 0.61 +0.2 1,078,922 + SMa1898 0.72 -0.7 1,079,005 + SMa1898 0.79 -0.8 1,079,006 - SMa1898 0.79 -1.4 1,079,073 + SMa1898 0.85 -3.2 1,079,074 - SMa1898 0.85 -3.4 1,079,244 - -0.4 1,079,285 + +0.1 1,079,662 - +0.3 1,079,682 - SMa1900 0.13 -0.5 1,079,846 + SMa1900 0.43 +0.2 1,079,846 + SMa1900 0.43 +0.5 1,079,846 + SMa1900 0.43 -0.4 1,079,846 + SMa1900 0.43 -0.6 1,079,847 - SMa1900 0.43 -0.1 1,079,937 + SMa1900 0.59 +0.2 1,079,938 - SMa1900 0.59 +0.2 1,079,982 + SMa1900 0.67 -0.1 1,080,029 - SMa1900 0.75 -0.2 1,080,239 + -0.1
Or see this region's nucleotide sequence