Experiment: Cisplatin 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa0765 and SMa0766 are separated by 11 nucleotides SMa0766 and SMa0767 are separated by 11 nucleotides SMa0767 and SMa0769 are separated by 3 nucleotides SMa0769 and SMa0771 are separated by 188 nucleotides SMa0771 and SMa0772 are separated by 102 nucleotides
SMa0765: SMa0765 - cbb3-type cytochrome c oxidase subunit I, at 414,187 to 415,806
SMa0765
SMa0766: SMa0766 - cbb3-type cytochrome c oxidase subunit II, at 415,818 to 416,549
SMa0766
SMa0767: SMa0767 - FixQ2 nitrogen fixation protein, at 416,561 to 416,713
SMa0767
SMa0769: SMa0769 - FixP2 Diheme c-type cytochrome, at 416,717 to 417,580
SMa0769
SMa0771: SMa0771 - hypothetical protein, at 417,769 to 418,242
SMa0771
SMa0772: SMa0772 - NodL Nod factor acetyltransferase, at 418,345 to 418,896
SMa0772
Position (kb) 416
417
418 Strain fitness (log2 ratio) -2
-1
0
1
2 at 415.804 kb on + strand at 415.817 kb on + strand at 415.929 kb on + strand, within SMa0766 at 415.971 kb on + strand, within SMa0766 at 415.971 kb on + strand, within SMa0766 at 415.971 kb on + strand, within SMa0766 at 416.005 kb on - strand, within SMa0766 at 416.022 kb on + strand, within SMa0766 at 416.023 kb on - strand, within SMa0766 at 416.023 kb on - strand, within SMa0766 at 416.074 kb on - strand, within SMa0766 at 416.082 kb on + strand, within SMa0766 at 416.082 kb on + strand, within SMa0766 at 416.106 kb on + strand, within SMa0766 at 416.106 kb on + strand, within SMa0766 at 416.107 kb on - strand, within SMa0766 at 416.107 kb on - strand, within SMa0766 at 416.172 kb on + strand, within SMa0766 at 416.173 kb on - strand, within SMa0766 at 416.245 kb on - strand, within SMa0766 at 416.245 kb on - strand, within SMa0766 at 416.261 kb on + strand, within SMa0766 at 416.262 kb on - strand, within SMa0766 at 416.262 kb on - strand, within SMa0766 at 416.325 kb on + strand, within SMa0766 at 416.362 kb on + strand, within SMa0766 at 416.362 kb on + strand, within SMa0766 at 416.363 kb on - strand, within SMa0766 at 416.524 kb on - strand at 416.573 kb on - strand at 416.573 kb on - strand at 416.742 kb on + strand at 416.751 kb on + strand at 416.752 kb on - strand at 416.820 kb on - strand, within SMa0769 at 416.868 kb on - strand, within SMa0769 at 417.173 kb on + strand, within SMa0769 at 417.174 kb on - strand, within SMa0769 at 417.287 kb on + strand, within SMa0769 at 417.288 kb on - strand, within SMa0769 at 417.288 kb on - strand, within SMa0769 at 417.288 kb on - strand, within SMa0769 at 418.141 kb on - strand, within SMa0771 at 418.195 kb on - strand at 418.260 kb on - strand at 418.292 kb on - strand at 418.292 kb on - strand at 418.455 kb on + strand, within SMa0772 at 418.456 kb on - strand, within SMa0772 at 418.559 kb on - strand, within SMa0772
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0005 mg/ml remove 415,804 + +1.9 415,817 + -0.2 415,929 + SMa0766 0.15 -0.8 415,971 + SMa0766 0.21 -1.4 415,971 + SMa0766 0.21 -0.3 415,971 + SMa0766 0.21 +0.9 416,005 - SMa0766 0.26 -0.7 416,022 + SMa0766 0.28 +0.1 416,023 - SMa0766 0.28 +0.9 416,023 - SMa0766 0.28 -0.6 416,074 - SMa0766 0.35 -0.0 416,082 + SMa0766 0.36 -0.5 416,082 + SMa0766 0.36 -0.7 416,106 + SMa0766 0.39 +0.2 416,106 + SMa0766 0.39 +0.5 416,107 - SMa0766 0.39 +1.0 416,107 - SMa0766 0.39 -1.7 416,172 + SMa0766 0.48 -0.4 416,173 - SMa0766 0.48 +0.0 416,245 - SMa0766 0.58 -1.5 416,245 - SMa0766 0.58 +0.2 416,261 + SMa0766 0.61 -0.9 416,262 - SMa0766 0.61 -0.8 416,262 - SMa0766 0.61 +0.9 416,325 + SMa0766 0.69 -0.0 416,362 + SMa0766 0.74 +1.5 416,362 + SMa0766 0.74 -2.1 416,363 - SMa0766 0.74 +0.2 416,524 - -1.7 416,573 - +0.4 416,573 - -0.0 416,742 + +0.4 416,751 + +0.9 416,752 - +0.1 416,820 - SMa0769 0.12 +0.7 416,868 - SMa0769 0.17 -1.2 417,173 + SMa0769 0.53 +0.9 417,174 - SMa0769 0.53 -0.6 417,287 + SMa0769 0.66 -0.5 417,288 - SMa0769 0.66 +0.3 417,288 - SMa0769 0.66 +0.4 417,288 - SMa0769 0.66 +0.3 418,141 - SMa0771 0.78 +0.3 418,195 - +1.0 418,260 - +0.7 418,292 - -0.8 418,292 - -0.5 418,455 + SMa0772 0.20 -0.2 418,456 - SMa0772 0.20 +0.1 418,559 - SMa0772 0.39 -0.8
Or see this region's nucleotide sequence