Experiment: Cisplatin 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa0298 and SMa0299 are separated by 2 nucleotides SMa0299 and SMa0300 overlap by 4 nucleotides SMa0300 and SMa0301 overlap by 4 nucleotides
SMa0298: SMa0298 - ABC transporter ATP-binding protein, at 163,041 to 164,855
SMa0298
SMa0299: SMa0299 - ABC transporter permease, at 164,858 to 165,745
SMa0299
SMa0300: SMa0300 - ABC transporter permease, at 165,742 to 166,695
SMa0300
SMa0301: SMa0301 - hypothetical protein, at 166,692 to 167,360
SMa0301
Position (kb) 164
165
166 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 164.113 kb on + strand, within SMa0298 at 164.113 kb on + strand, within SMa0298 at 164.141 kb on + strand, within SMa0298 at 164.176 kb on + strand, within SMa0298 at 164.177 kb on - strand, within SMa0298 at 164.177 kb on - strand, within SMa0298 at 164.177 kb on - strand, within SMa0298 at 164.177 kb on - strand, within SMa0298 at 164.177 kb on - strand, within SMa0298 at 164.297 kb on + strand, within SMa0298 at 164.298 kb on - strand, within SMa0298 at 164.457 kb on + strand, within SMa0298 at 164.815 kb on + strand at 164.816 kb on - strand at 164.856 kb on - strand at 164.978 kb on + strand, within SMa0299 at 164.979 kb on - strand, within SMa0299 at 165.082 kb on - strand, within SMa0299 at 165.085 kb on + strand, within SMa0299 at 165.085 kb on + strand, within SMa0299 at 165.086 kb on - strand, within SMa0299 at 165.086 kb on - strand, within SMa0299 at 165.161 kb on - strand, within SMa0299 at 165.192 kb on + strand, within SMa0299 at 165.193 kb on - strand, within SMa0299 at 165.252 kb on + strand, within SMa0299 at 165.403 kb on + strand, within SMa0299 at 165.403 kb on + strand, within SMa0299 at 165.406 kb on - strand, within SMa0299 at 165.481 kb on + strand, within SMa0299 at 165.482 kb on - strand, within SMa0299 at 165.598 kb on - strand, within SMa0299 at 165.736 kb on + strand at 165.813 kb on - strand at 165.813 kb on - strand at 165.902 kb on + strand, within SMa0300 at 165.903 kb on - strand, within SMa0300 at 166.055 kb on + strand, within SMa0300 at 166.055 kb on + strand, within SMa0300 at 166.055 kb on + strand, within SMa0300 at 166.055 kb on + strand, within SMa0300 at 166.056 kb on - strand, within SMa0300 at 166.107 kb on - strand, within SMa0300 at 166.119 kb on + strand, within SMa0300 at 166.120 kb on - strand, within SMa0300 at 166.120 kb on - strand, within SMa0300 at 166.364 kb on + strand, within SMa0300 at 166.365 kb on - strand, within SMa0300 at 166.496 kb on + strand, within SMa0300 at 166.685 kb on - strand at 166.685 kb on - strand at 166.685 kb on - strand at 166.685 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0005 mg/ml remove 164,113 + SMa0298 0.59 +0.5 164,113 + SMa0298 0.59 +1.0 164,141 + SMa0298 0.61 -0.0 164,176 + SMa0298 0.63 -0.7 164,177 - SMa0298 0.63 -0.1 164,177 - SMa0298 0.63 -0.0 164,177 - SMa0298 0.63 +0.2 164,177 - SMa0298 0.63 -0.7 164,177 - SMa0298 0.63 -3.4 164,297 + SMa0298 0.69 -0.4 164,298 - SMa0298 0.69 +0.5 164,457 + SMa0298 0.78 -1.5 164,815 + -0.2 164,816 - -2.0 164,856 - -0.2 164,978 + SMa0299 0.14 -0.7 164,979 - SMa0299 0.14 -1.0 165,082 - SMa0299 0.25 -0.3 165,085 + SMa0299 0.26 -1.7 165,085 + SMa0299 0.26 -0.8 165,086 - SMa0299 0.26 -1.1 165,086 - SMa0299 0.26 +0.4 165,161 - SMa0299 0.34 -0.2 165,192 + SMa0299 0.38 -1.0 165,193 - SMa0299 0.38 -0.3 165,252 + SMa0299 0.44 +0.3 165,403 + SMa0299 0.61 +0.7 165,403 + SMa0299 0.61 -1.3 165,406 - SMa0299 0.62 +0.6 165,481 + SMa0299 0.70 -1.3 165,482 - SMa0299 0.70 -1.7 165,598 - SMa0299 0.83 -0.2 165,736 + -0.3 165,813 - -0.9 165,813 - -1.2 165,902 + SMa0300 0.17 -0.2 165,903 - SMa0300 0.17 +0.2 166,055 + SMa0300 0.33 +0.0 166,055 + SMa0300 0.33 -1.0 166,055 + SMa0300 0.33 +0.0 166,055 + SMa0300 0.33 -0.9 166,056 - SMa0300 0.33 +1.3 166,107 - SMa0300 0.38 +0.5 166,119 + SMa0300 0.40 -0.9 166,120 - SMa0300 0.40 +0.2 166,120 - SMa0300 0.40 -0.0 166,364 + SMa0300 0.65 +0.3 166,365 - SMa0300 0.65 +1.3 166,496 + SMa0300 0.79 -0.7 166,685 - -1.1 166,685 - -1.5 166,685 - +0.6 166,685 - +1.2
Or see this region's nucleotide sequence