Strain Fitness in Sinorhizobium meliloti 1021 around SMa0206
Experiment: Cisplatin 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.0005 mg/ml |
---|---|---|---|---|---|
remove | |||||
112,952 | - | SMa0204 | 0.30 | -0.6 | |
113,016 | + | SMa0204 | 0.35 | +0.2 | |
113,018 | + | SMa0204 | 0.35 | -0.2 | |
113,063 | + | SMa0204 | 0.39 | +1.0 | |
113,063 | + | SMa0204 | 0.39 | -0.2 | |
113,063 | + | SMa0204 | 0.39 | +0.1 | |
113,063 | + | SMa0204 | 0.39 | -0.8 | |
113,399 | + | SMa0204 | 0.66 | +0.3 | |
113,747 | + | -0.8 | |||
113,748 | - | +3.2 | |||
113,748 | - | -0.7 | |||
113,748 | - | -0.0 | |||
113,864 | + | -2.2 | |||
113,864 | + | -1.3 | |||
113,865 | - | +0.2 | |||
113,959 | + | SMa0206 | 0.19 | -0.3 | |
113,971 | + | SMa0206 | 0.21 | -0.0 | |
114,086 | + | SMa0206 | 0.37 | -2.2 | |
114,086 | + | SMa0206 | 0.37 | +3.6 | |
114,087 | - | SMa0206 | 0.37 | -1.6 | |
114,087 | - | SMa0206 | 0.37 | +0.5 | |
114,134 | + | SMa0206 | 0.43 | +2.9 | |
114,310 | + | SMa0206 | 0.67 | -1.3 | |
114,311 | - | SMa0206 | 0.68 | +0.9 | |
114,398 | + | SMa0206 | 0.80 | +0.2 | |
114,489 | - | -1.0 | |||
114,489 | - | -2.5 | |||
114,519 | + | -2.7 | |||
114,600 | + | -1.0 | |||
114,601 | - | +0.1 | |||
114,629 | - | +0.1 | |||
114,649 | + | +0.9 | |||
114,693 | + | +0.6 | |||
114,801 | + | SMa0209 | 0.12 | +0.1 | |
114,807 | + | SMa0209 | 0.13 | -1.9 | |
114,807 | + | SMa0209 | 0.13 | -0.4 | |
114,837 | - | SMa0209 | 0.15 | -0.4 | |
114,837 | - | SMa0209 | 0.15 | -1.9 | |
114,849 | + | SMa0209 | 0.17 | -1.4 | |
114,853 | + | SMa0209 | 0.17 | +0.2 | |
114,853 | + | SMa0209 | 0.17 | -0.2 | |
114,853 | + | SMa0209 | 0.17 | +1.1 | |
114,853 | + | SMa0209 | 0.17 | -1.4 | |
114,980 | + | SMa0209 | 0.29 | -0.6 | |
115,067 | + | SMa0209 | 0.37 | -1.0 | |
115,067 | + | SMa0209 | 0.37 | +0.1 | |
115,068 | - | SMa0209 | 0.37 | +0.5 | |
115,071 | + | SMa0209 | 0.37 | -1.6 | |
115,274 | + | SMa0209 | 0.56 | -0.8 | |
115,274 | + | SMa0209 | 0.56 | +0.6 | |
115,274 | + | SMa0209 | 0.56 | +0.5 | |
115,275 | - | SMa0209 | 0.56 | -1.0 | |
115,275 | - | SMa0209 | 0.56 | +0.1 | |
115,278 | + | SMa0209 | 0.56 | +0.4 | |
115,278 | + | SMa0209 | 0.56 | -1.6 | |
115,278 | + | SMa0209 | 0.56 | -0.5 | |
115,278 | + | SMa0209 | 0.56 | -1.5 | |
115,279 | - | SMa0209 | 0.56 | -1.0 | |
115,279 | - | SMa0209 | 0.56 | -1.2 | |
115,280 | + | SMa0209 | 0.56 | -1.0 | |
115,281 | - | SMa0209 | 0.56 | -0.8 | |
115,317 | + | SMa0209 | 0.60 | -0.6 | |
115,317 | + | SMa0209 | 0.60 | -0.1 | |
115,318 | - | SMa0209 | 0.60 | +1.4 | |
115,318 | - | SMa0209 | 0.60 | +3.3 | |
115,464 | + | SMa0209 | 0.73 | -1.0 | |
115,465 | - | SMa0209 | 0.73 | +0.2 |
Or see this region's nucleotide sequence